RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 ABCC8Q09428 1581 aa-1.79□□□□□ -2.7
COPS3-206ENST00000471414 BOD1L1Q8NFC6 3051 aa-1.8□□□□□ -2.7
COPS3-206ENST00000471414 RPS29P62273 56 aaKnown RBP-1.8□□□□□ -2.7
COPS3-206ENST00000471414 NFAT5O94916 1531 aa-1.81□□□□□ -2.7
COPS3-206ENST00000471414 FANCD2Q9BXW9 1451 aa-1.82□□□□□ -2.7
COPS3-206ENST00000471414 CMC2Q9NRP2 79 aa-1.83□□□□□ -2.7
COPS3-206ENST00000471414 SMIM31A0A1B0GVY4 71 aa-1.86□□□□□ -2.71
COPS3-206ENST00000471414 FRYLO94915 3013 aa-1.9□□□□□ -2.71
COPS3-206ENST00000471414 CENPEQ02224 2701 aa-1.91□□□□□ -2.72
COPS3-206ENST00000471414 NDUFA1O15239 70 aa-1.91□□□□□ -2.72
COPS3-206ENST00000471414 MT1FP04733 61 aa-1.94□□□□□ -2.72
COPS3-206ENST00000471414 PCNTO95613 3336 aa-1.95□□□□□ -2.72
COPS3-206ENST00000471414 WDFY3Q8IZQ1 3526 aa-1.95□□□□□ -2.72
COPS3-206ENST00000471414 CEP250Q9BV73 2442 aa-1.97□□□□□ -2.73
COPS3-206ENST00000471414 ERICH3Q5RHP9 1530 aa-2.01□□□□□ -2.73
COPS3-206ENST00000471414 DMDP11532 3685 aa-2.01□□□□□ -2.73
COPS3-206ENST00000471414 CEP350Q5VT06 3117 aa-2.02□□□□□ -2.73
COPS3-206ENST00000471414 SZT2Q5T011 3432 aa-2.05□□□□□ -2.74
COPS3-206ENST00000471414 SPEGQ15772 3267 aa-2.06□□□□□ -2.74
COPS3-206ENST00000471414 TOMM7Q9P0U1 55 aa-2.06□□□□□ -2.74
COPS3-206ENST00000471414 LINC01590Q5TEZ4 76 aa-2.1□□□□□ -2.75
COPS3-206ENST00000471414 WDFY4Q6ZS81 3184 aa-2.1□□□□□ -2.75
COPS3-206ENST00000471414 RHPN1-AS1Q9BWJ2 59 aa-2.13□□□□□ -2.75
COPS3-206ENST00000471414 SNRPGP15A8MWD9 76 aa-2.14□□□□□ -2.75
COPS3-206ENST00000471414 SAMD9LQ8IVG5 1584 aa-2.18□□□□□ -2.76
COPS3-206ENST00000471414 DUOX1Q9NRD9 1551 aa-2.18□□□□□ -2.76
COPS3-206ENST00000471414 DEFB133Q30KQ1 61 aa-2.2□□□□□ -2.76
COPS3-206ENST00000471414 DCHS1Q96JQ0 3298 aa-2.2□□□□□ -2.76
COPS3-206ENST00000471414 MUC3AQ02505 3323 aa-2.21□□□□□ -2.76
COPS3-206ENST00000471414 EP400Q96L91 3159 aa-2.21□□□□□ -2.76
COPS3-206ENST00000471414 IQGAP2Q13576 1575 aa-2.23□□□□□ -2.77
COPS3-206ENST00000471414 TTTY10Q9BZA0 68 aa-2.23□□□□□ -2.77
COPS3-206ENST00000471414 LOC400499M0QZD8 3231 aa-2.24□□□□□ -2.77
COPS3-206ENST00000471414 RPL39P62891 51 aaKnown RBP-2.24□□□□□ -2.77
COPS3-206ENST00000471414 DNAH12Q6ZR08 3092 aa-2.25□□□□□ -2.77
COPS3-206ENST00000471414 XIRP2A4UGR9 3374 aa-2.28□□□□□ -2.77
COPS3-206ENST00000471414 A0A096LNI7 61 aa-2.28□□□□□ -2.77
COPS3-206ENST00000471414 HTN1P15515 57 aa-2.3□□□□□ -2.78
COPS3-206ENST00000471414 MKI67P46013 3256 aaKnown RBP-2.3□□□□□ -2.78
COPS3-206ENST00000471414 ATP7AQ04656 1500 aa-2.31□□□□□ -2.78
COPS3-206ENST00000471414 TOP2AP11388 1531 aaKnown RBP-2.32□□□□□ -2.78
COPS3-206ENST00000471414 MROH2BQ7Z745 1585 aa-2.35□□□□□ -2.79
COPS3-206ENST00000471414 CD52P31358 61 aa-2.35□□□□□ -2.79
COPS3-206ENST00000471414 RPL39LQ96EH5 51 aaKnown RBP-2.35□□□□□ -2.79
COPS3-206ENST00000471414 TOMM5Q8N4H5 51 aa-2.36□□□□□ -2.79
COPS3-206ENST00000471414 DEFB124Q8NES8 71 aa-2.37□□□□□ -2.79
COPS3-206ENST00000471414 USP34Q70CQ2 3546 aa-2.38□□□□□ -2.79
COPS3-206ENST00000471414 VCANP13611 3396 aa-2.43□□□□□ -2.8
COPS3-206ENST00000471414 UNC80Q8N2C7 3258 aa-2.43□□□□□ -2.8
COPS3-206ENST00000471414 DNAH14Q0VDD8 3507 aa-2.44□□□□□ -2.8
COPS3-206ENST00000471414 CFAP47Q6ZTR5 3102 aa-2.45□□□□□ -2.8
COPS3-206ENST00000471414 KRTAP19-2Q3LHN2 52 aa-2.51□□□□□ -2.81
COPS3-206ENST00000471414 DEFB104AQ8WTQ1 72 aa-2.51□□□□□ -2.81
COPS3-206ENST00000471414 ASPMQ8IZT6 3477 aa-2.52□□□□□ -2.81
COPS3-206ENST00000471414 H3BUX3 64 aa-2.61□□□□□ -2.83
COPS3-206ENST00000471414 BRCA2P51587 3418 aa-2.62□□□□□ -2.83
COPS3-206ENST00000471414 LINC01556Q5JQF7 62 aa-2.69□□□□□ -2.84
COPS3-206ENST00000471414 CENPFP49454 3210 aa-2.7□□□□□ -2.84
COPS3-206ENST00000471414 K7EIM0 57 aa-2.73□□□□□ -2.85
COPS3-206ENST00000471414 GCC2Q8IWJ2 1684 aa-2.79□□□□□ -2.86
COPS3-206ENST00000471414 CDH23Q9H251 3354 aa-2.81□□□□□ -2.86
COPS3-206ENST00000471414 ARHGAP5-AS1Q96IT6 56 aa-2.83□□□□□ -2.86
COPS3-206ENST00000471414 VPS13AQ96RL7 3174 aa-2.88□□□□□ -2.87
COPS3-206ENST00000471414 SNRPGP62308 76 aaKnown RBP-2.9□□□□□ -2.87
COPS3-206ENST00000471414 PRCDQ00LT1 54 aa-2.9□□□□□ -2.87
COPS3-206ENST00000471414 APELAP0DMC3 54 aa-2.98□□□□□ -2.89
COPS3-206ENST00000471414 A0A096LPF7 62 aa-2.99□□□□□ -2.89
COPS3-206ENST00000471414 TMEM167AQ8TBQ9 72 aa-3.02□□□□□ -2.89
COPS3-206ENST00000471414 UTRNP46939 3433 aa-3.08□□□□□ -2.9
COPS3-206ENST00000471414 RPL39P5Q59GN2 51 aa-3.2□□□□□ -2.92
COPS3-206ENST00000471414 HTN3P15516 51 aa-3.22□□□□□ -2.92
COPS3-206ENST00000471414 H3BSH0 61 aa-3.24□□□□□ -2.93
COPS3-206ENST00000471414 GOLGB1Q14789 3259 aaKnown RBP-3.24□□□□□ -2.93
COPS3-206ENST00000471414 DEFB108AA8MXU0 73 aa-3.28□□□□□ -2.93
COPS3-206ENST00000471414 Q9Y3F1 56 aa-3.3□□□□□ -2.94
COPS3-206ENST00000471414 COX14Q96I36 57 aa-3.6□□□□□ -2.99
COPS3-206ENST00000471414 DEFB108BQ8NET1 73 aa-3.7□□□□□ -3
COPS3-206ENST00000471414 STATHP02808 62 aa-4.2□□□□□ -3.08
Retrieved 78 of 20,778 RNA–protein pairs in 77.1 ms