RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 SPRR2BP35325 72 aa4.75□□□□□ -1.65
HLA-C-206ENST00000470363 SPRR2AP35326 72 aa4.75□□□□□ -1.65
HLA-C-206ENST00000470363 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
HLA-C-206ENST00000470363 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
HLA-C-206ENST00000470363 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
HLA-C-206ENST00000470363 K7ERS5 55 aa4.71□□□□□ -1.66
HLA-C-206ENST00000470363 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
HLA-C-206ENST00000470363 KRTAP2-1Q9BYU5 128 aa4.67□□□□□ -1.66
HLA-C-206ENST00000470363 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
HLA-C-206ENST00000470363 H3BS24 57 aa4.61□□□□□ -1.67
HLA-C-206ENST00000470363 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
HLA-C-206ENST00000470363 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
HLA-C-206ENST00000470363 SPRR2DP22532 72 aa4.59□□□□□ -1.67
HLA-C-206ENST00000470363 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
HLA-C-206ENST00000470363 ROMO1P60602 79 aa4.51□□□□□ -1.69
HLA-C-206ENST00000470363 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
HLA-C-206ENST00000470363 TNP1P09430 55 aa4.48□□□□□ -1.69
HLA-C-206ENST00000470363 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
HLA-C-206ENST00000470363 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
HLA-C-206ENST00000470363 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
HLA-C-206ENST00000470363 MT1EP04732 61 aa4.29□□□□□ -1.72
HLA-C-206ENST00000470363 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
HLA-C-206ENST00000470363 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
HLA-C-206ENST00000470363 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
HLA-C-206ENST00000470363 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
HLA-C-206ENST00000470363 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
HLA-C-206ENST00000470363 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
HLA-C-206ENST00000470363 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
HLA-C-206ENST00000470363 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
HLA-C-206ENST00000470363 MT1GP13640 62 aa4.16□□□□□ -1.74
HLA-C-206ENST00000470363 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
HLA-C-206ENST00000470363 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
HLA-C-206ENST00000470363 MT1MQ8N339 61 aa4.09□□□□□ -1.75
HLA-C-206ENST00000470363 MT1LQ93083 61 aa4.08□□□□□ -1.76
HLA-C-206ENST00000470363 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
HLA-C-206ENST00000470363 MT4P47944 62 aa4.03□□□□□ -1.76
HLA-C-206ENST00000470363 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
HLA-C-206ENST00000470363 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
HLA-C-206ENST00000470363 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
HLA-C-206ENST00000470363 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
HLA-C-206ENST00000470363 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
HLA-C-206ENST00000470363 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
HLA-C-206ENST00000470363 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
HLA-C-206ENST00000470363 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
HLA-C-206ENST00000470363 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
HLA-C-206ENST00000470363 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
HLA-C-206ENST00000470363 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
HLA-C-206ENST00000470363 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
HLA-C-206ENST00000470363 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
HLA-C-206ENST00000470363 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
HLA-C-206ENST00000470363 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
HLA-C-206ENST00000470363 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
HLA-C-206ENST00000470363 MT1AP04731 61 aa3.45□□□□□ -1.86
HLA-C-206ENST00000470363 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
HLA-C-206ENST00000470363 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
HLA-C-206ENST00000470363 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
HLA-C-206ENST00000470363 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
HLA-C-206ENST00000470363 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
HLA-C-206ENST00000470363 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
HLA-C-206ENST00000470363 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
HLA-C-206ENST00000470363 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
HLA-C-206ENST00000470363 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
HLA-C-206ENST00000470363 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
HLA-C-206ENST00000470363 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
HLA-C-206ENST00000470363 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
HLA-C-206ENST00000470363 MT3P25713 68 aa3.15□□□□□ -1.91
HLA-C-206ENST00000470363 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
HLA-C-206ENST00000470363 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
HLA-C-206ENST00000470363 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
HLA-C-206ENST00000470363 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
HLA-C-206ENST00000470363 INE1O15225 51 aa2.65□□□□□ -1.99
HLA-C-206ENST00000470363 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
HLA-C-206ENST00000470363 PRM1P04553 51 aa2.38□□□□□ -2.03
HLA-C-206ENST00000470363 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
HLA-C-206ENST00000470363 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
HLA-C-206ENST00000470363 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
HLA-C-206ENST00000470363 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
HLA-C-206ENST00000470363 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms