RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 DNAH10Q8IVF4 4471 aa0.89□□□□□ -2.27
COL11A1-208ENST00000470170 PKHD1L1Q86WI1 4243 aa0.88□□□□□ -2.27
COL11A1-208ENST00000470170 FAT3Q8TDW7 4589 aa0.88□□□□□ -2.27
COL11A1-208ENST00000470170 USH2AO75445 5202 aa0.87□□□□□ -2.27
COL11A1-208ENST00000470170 PLECQ15149 4684 aaKnown RBP0.87□□□□□ -2.27
COL11A1-208ENST00000470170 DEFB108BQ8NET1 73 aa0.87□□□□□ -2.27
COL11A1-208ENST00000470170 LRP1Q07954 4544 aaKnown RBP0.87□□□□□ -2.27
COL11A1-208ENST00000470170 LRP1BQ9NZR2 4599 aa0.86□□□□□ -2.27
COL11A1-208ENST00000470170 TNP1P09430 55 aa0.86□□□□□ -2.27
COL11A1-208ENST00000470170 MT1HL1P0DM35 61 aa0.86□□□□□ -2.27
COL11A1-208ENST00000470170 MUC5BQ9HC84 5762 aaPredicted RBP0.86□□□□□ -2.27
COL11A1-208ENST00000470170 H3BSH0 61 aa0.85□□□□□ -2.27
COL11A1-208ENST00000470170 H3BNG1 76 aa0.84□□□□□ -2.27
COL11A1-208ENST00000470170 DEFB110Q30KQ9 67 aa0.84□□□□□ -2.27
COL11A1-208ENST00000470170 VPS13BQ7Z7G8 4022 aa0.84□□□□□ -2.28
COL11A1-208ENST00000470170 DNAH6Q9C0G6 4158 aa0.84□□□□□ -2.28
COL11A1-208ENST00000470170 MUC12Q9UKN1 5478 aa0.83□□□□□ -2.28
COL11A1-208ENST00000470170 AHNAKQ09666 5890 aaKnown RBP0.83□□□□□ -2.28
COL11A1-208ENST00000470170 SPRR2EP22531 72 aa0.83□□□□□ -2.28
COL11A1-208ENST00000470170 SPRR2BP35325 72 aa0.83□□□□□ -2.28
COL11A1-208ENST00000470170 SPRR2AP35326 72 aa0.83□□□□□ -2.28
COL11A1-208ENST00000470170 DNAH3Q8TD57 4116 aa0.83□□□□□ -2.28
COL11A1-208ENST00000470170 VPS13DQ5THJ4 4388 aa0.82□□□□□ -2.28
COL11A1-208ENST00000470170 K7EIM0 57 aa0.82□□□□□ -2.28
COL11A1-208ENST00000470170 PRM1P04553 51 aa0.82□□□□□ -2.28
COL11A1-208ENST00000470170 DNAH5Q8TE73 4624 aa0.82□□□□□ -2.28
COL11A1-208ENST00000470170 DNAH2Q9P225 4427 aa0.81□□□□□ -2.28
COL11A1-208ENST00000470170 PKD1P98161 4303 aa0.81□□□□□ -2.28
COL11A1-208ENST00000470170 SPRR2DP22532 72 aa0.81□□□□□ -2.28
COL11A1-208ENST00000470170 KRTAP19-6Q3LI70 58 aa0.81□□□□□ -2.28
COL11A1-208ENST00000470170 COX14Q96I36 57 aa0.81□□□□□ -2.28
COL11A1-208ENST00000470170 H3BUX3 64 aa0.8□□□□□ -2.28
COL11A1-208ENST00000470170 SPART-AS1P0CW21 52 aa0.8□□□□□ -2.28
COL11A1-208ENST00000470170 MT1HP80294 61 aa0.79□□□□□ -2.28
COL11A1-208ENST00000470170 DNAH17Q9UFH2 4485 aa0.77□□□□□ -2.29
COL11A1-208ENST00000470170 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
COL11A1-208ENST00000470170 TMEM167AQ8TBQ9 72 aa0.76□□□□□ -2.29
COL11A1-208ENST00000470170 TNXBP22105 4242 aa0.75□□□□□ -2.29
COL11A1-208ENST00000470170 DEFB136Q30KP8 78 aa0.75□□□□□ -2.29
COL11A1-208ENST00000470170 LPAP08519 4548 aa0.75□□□□□ -2.29
COL11A1-208ENST00000470170 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
COL11A1-208ENST00000470170 SPRR2FQ96RM1 72 aa0.74□□□□□ -2.29
COL11A1-208ENST00000470170 MT4P47944 62 aa0.72□□□□□ -2.29
COL11A1-208ENST00000470170 DEFB4AO15263 64 aa0.7□□□□□ -2.3
COL11A1-208ENST00000470170 HTN3P15516 51 aa0.68□□□□□ -2.3
COL11A1-208ENST00000470170 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
COL11A1-208ENST00000470170 MUC17Q685J3 4493 aa0.67□□□□□ -2.3
COL11A1-208ENST00000470170 RHPN1-AS1Q9BWJ2 59 aa0.66□□□□□ -2.3
COL11A1-208ENST00000470170 RPL39P5Q59GN2 51 aa0.65□□□□□ -2.31
COL11A1-208ENST00000470170 DNAH8Q96JB1 4490 aa0.64□□□□□ -2.31
COL11A1-208ENST00000470170 KRTAP19-2Q3LHN2 52 aa0.64□□□□□ -2.31
COL11A1-208ENST00000470170 KRTAP8-1Q8IUC2 63 aa0.64□□□□□ -2.31
COL11A1-208ENST00000470170 MT2AP02795 61 aa0.62□□□□□ -2.31
COL11A1-208ENST00000470170 MT1AP04731 61 aa0.62□□□□□ -2.31
COL11A1-208ENST00000470170 MT1FP04733 61 aa0.61□□□□□ -2.31
COL11A1-208ENST00000470170 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
COL11A1-208ENST00000470170 FLGP20930 4061 aaPredicted RBP0.57□□□□□ -2.32
COL11A1-208ENST00000470170 A0A096LNI7 61 aa0.56□□□□□ -2.32
COL11A1-208ENST00000470170 KRTAP20-2Q3LI61 65 aa0.56□□□□□ -2.32
COL11A1-208ENST00000470170 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
COL11A1-208ENST00000470170 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
COL11A1-208ENST00000470170 A0A096LPF7 62 aa0.52□□□□□ -2.33
COL11A1-208ENST00000470170 APELAP0DMC3 54 aa0.52□□□□□ -2.33
COL11A1-208ENST00000470170 LINC01556Q5JQF7 62 aa0.52□□□□□ -2.33
COL11A1-208ENST00000470170 HTN1P15515 57 aa0.5□□□□□ -2.33
COL11A1-208ENST00000470170 KRTAP19-5Q3LI72 72 aa0.49□□□□□ -2.33
COL11A1-208ENST00000470170 DEFB1P60022 68 aa0.48□□□□□ -2.33
COL11A1-208ENST00000470170 MT1BP07438 61 aa0.46□□□□□ -2.34
COL11A1-208ENST00000470170 RPS29P62273 56 aaKnown RBP0.45□□□□□ -2.34
COL11A1-208ENST00000470170 MT1GP13640 62 aa0.41□□□□□ -2.34
COL11A1-208ENST00000470170 KRTAP19-8Q3LI54 63 aa0.4□□□□□ -2.35
COL11A1-208ENST00000470170 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
COL11A1-208ENST00000470170 MT1EP04732 61 aa0.34□□□□□ -2.36
COL11A1-208ENST00000470170 MT1MQ8N339 61 aa0.34□□□□□ -2.36
COL11A1-208ENST00000470170 MT1XP80297 61 aa0.32□□□□□ -2.36
COL11A1-208ENST00000470170 MT1LQ93083 61 aa0.3□□□□□ -2.36
COL11A1-208ENST00000470170 KRTAP19-7Q3SYF9 63 aa0.28□□□□□ -2.36
COL11A1-208ENST00000470170 KRTAP6-1Q3LI64 71 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 58.3 ms