RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 SPINT4Q6UDR6 99 aa5.08□□□□□ -1.6
HDAC6-217ENST00000469223 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
HDAC6-217ENST00000469223 PLAC4Q8WY50 150 aa5.05□□□□□ -1.6
HDAC6-217ENST00000469223 SPRR5A0A1B0GTR4 108 aa5.04□□□□□ -1.6
HDAC6-217ENST00000469223 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
HDAC6-217ENST00000469223 KRTAP12-1P59990 96 aa5.01□□□□□ -1.61
HDAC6-217ENST00000469223 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
HDAC6-217ENST00000469223 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
HDAC6-217ENST00000469223 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
HDAC6-217ENST00000469223 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
HDAC6-217ENST00000469223 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
HDAC6-217ENST00000469223 ROMO1P60602 79 aa4.89□□□□□ -1.63
HDAC6-217ENST00000469223 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.63
HDAC6-217ENST00000469223 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
HDAC6-217ENST00000469223 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
HDAC6-217ENST00000469223 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
HDAC6-217ENST00000469223 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
HDAC6-217ENST00000469223 KRTAP5-4Q6L8H1 288 aa4.75□□□□□ -1.65
HDAC6-217ENST00000469223 TNP1P09430 55 aa4.74□□□□□ -1.65
HDAC6-217ENST00000469223 MT1EP04732 61 aa4.72□□□□□ -1.65
HDAC6-217ENST00000469223 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
HDAC6-217ENST00000469223 KRTAP19-7Q3SYF9 63 aa4.71□□□□□ -1.66
HDAC6-217ENST00000469223 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
HDAC6-217ENST00000469223 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
HDAC6-217ENST00000469223 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
HDAC6-217ENST00000469223 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
HDAC6-217ENST00000469223 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
HDAC6-217ENST00000469223 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
HDAC6-217ENST00000469223 MT1GP13640 62 aa4.58□□□□□ -1.68
HDAC6-217ENST00000469223 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
HDAC6-217ENST00000469223 MT1MQ8N339 61 aa4.56□□□□□ -1.68
HDAC6-217ENST00000469223 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
HDAC6-217ENST00000469223 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
HDAC6-217ENST00000469223 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
HDAC6-217ENST00000469223 MT1LQ93083 61 aa4.38□□□□□ -1.71
HDAC6-217ENST00000469223 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
HDAC6-217ENST00000469223 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
HDAC6-217ENST00000469223 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
HDAC6-217ENST00000469223 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
HDAC6-217ENST00000469223 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
HDAC6-217ENST00000469223 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
HDAC6-217ENST00000469223 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
HDAC6-217ENST00000469223 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
HDAC6-217ENST00000469223 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
HDAC6-217ENST00000469223 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
HDAC6-217ENST00000469223 KRTAP9-9Q9BYP9 154 aa4.11□□□□□ -1.75
HDAC6-217ENST00000469223 H3BS24 57 aa4.1□□□□□ -1.75
HDAC6-217ENST00000469223 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
HDAC6-217ENST00000469223 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
HDAC6-217ENST00000469223 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
HDAC6-217ENST00000469223 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
HDAC6-217ENST00000469223 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
HDAC6-217ENST00000469223 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
HDAC6-217ENST00000469223 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
HDAC6-217ENST00000469223 KRTAP6-2Q3LI66 62 aa3.73□□□□□ -1.81
HDAC6-217ENST00000469223 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
HDAC6-217ENST00000469223 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
HDAC6-217ENST00000469223 MT1AP04731 61 aa3.7□□□□□ -1.82
HDAC6-217ENST00000469223 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
HDAC6-217ENST00000469223 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
HDAC6-217ENST00000469223 MT3P25713 68 aa3.39□□□□□ -1.87
HDAC6-217ENST00000469223 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
HDAC6-217ENST00000469223 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
HDAC6-217ENST00000469223 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
HDAC6-217ENST00000469223 INE1O15225 51 aa3.17□□□□□ -1.9
HDAC6-217ENST00000469223 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
HDAC6-217ENST00000469223 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
HDAC6-217ENST00000469223 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
HDAC6-217ENST00000469223 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
HDAC6-217ENST00000469223 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
HDAC6-217ENST00000469223 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
HDAC6-217ENST00000469223 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
HDAC6-217ENST00000469223 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
HDAC6-217ENST00000469223 PRM1P04553 51 aa2.5□□□□□ -2.01
HDAC6-217ENST00000469223 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
HDAC6-217ENST00000469223 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
HDAC6-217ENST00000469223 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
HDAC6-217ENST00000469223 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 102.9 ms