RNA–Protein interactions for RNA: ENST00000468621.5

SND1-207, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-207ENST00000468621 MDN1Q9NU22 5596 aa2.43□□□□□ -2.02
SND1-207ENST00000468621 TNP1P09430 55 aa2.42□□□□□ -2.02
SND1-207ENST00000468621 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
SND1-207ENST00000468621 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
SND1-207ENST00000468621 KRTAP2-3P0C7H8 128 aa2.38□□□□□ -2.03
SND1-207ENST00000468621 SPRR2GQ9BYE4 73 aa2.38□□□□□ -2.03
SND1-207ENST00000468621 KRTAP2-4Q9BYR9 128 aa2.38□□□□□ -2.03
SND1-207ENST00000468621 MT1BP07438 61 aa2.36□□□□□ -2.03
SND1-207ENST00000468621 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
SND1-207ENST00000468621 LCE5AQ5TCM9 118 aa2.36□□□□□ -2.03
SND1-207ENST00000468621 KRTAP19-4Q3LI73 84 aa2.33□□□□□ -2.04
SND1-207ENST00000468621 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
SND1-207ENST00000468621 INE1O15225 51 aa2.29□□□□□ -2.04
SND1-207ENST00000468621 KRTAP10-5P60370 271 aa2.29□□□□□ -2.04
SND1-207ENST00000468621 KRTAP2-2Q9BYT5 123 aa2.27□□□□□ -2.05
SND1-207ENST00000468621 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
SND1-207ENST00000468621 LCE3AQ5TA76 89 aa2.25□□□□□ -2.05
SND1-207ENST00000468621 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
SND1-207ENST00000468621 MT1XP80297 61 aa2.23□□□□□ -2.05
SND1-207ENST00000468621 KRTAP5-9P26371 169 aa2.22□□□□□ -2.05
SND1-207ENST00000468621 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
SND1-207ENST00000468621 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
SND1-207ENST00000468621 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
SND1-207ENST00000468621 SPRR2EP22531 72 aa2.19□□□□□ -2.06
SND1-207ENST00000468621 SPRR2BP35325 72 aa2.19□□□□□ -2.06
SND1-207ENST00000468621 SPRR2AP35326 72 aa2.19□□□□□ -2.06
SND1-207ENST00000468621 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
SND1-207ENST00000468621 SPRR2FQ96RM1 72 aa2.16□□□□□ -2.06
SND1-207ENST00000468621 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
SND1-207ENST00000468621 KRTAP10-12P60413 245 aa2.15□□□□□ -2.07
SND1-207ENST00000468621 SPRR2DP22532 72 aa2.12□□□□□ -2.07
SND1-207ENST00000468621 KRTAP10-7P60409 375 aaPredicted RBP2.12□□□□□ -2.07
SND1-207ENST00000468621 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
SND1-207ENST00000468621 LCE1AQ5T7P2 110 aa2.08□□□□□ -2.08
SND1-207ENST00000468621 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
SND1-207ENST00000468621 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
SND1-207ENST00000468621 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
SND1-207ENST00000468621 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
SND1-207ENST00000468621 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
SND1-207ENST00000468621 KRTAP19-7Q3SYF9 63 aa1.99□□□□□ -2.09
SND1-207ENST00000468621 MT1EP04732 61 aa1.96□□□□□ -2.1
SND1-207ENST00000468621 KRTAP19-3Q7Z4W3 81 aa1.93□□□□□ -2.1
SND1-207ENST00000468621 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
SND1-207ENST00000468621 KRTAP9-6A8MVA2 160 aa1.9□□□□□ -2.11
SND1-207ENST00000468621 MT1GP13640 62 aa1.89□□□□□ -2.11
SND1-207ENST00000468621 MT4P47944 62 aa1.89□□□□□ -2.11
SND1-207ENST00000468621 MT1LQ93083 61 aa1.88□□□□□ -2.11
SND1-207ENST00000468621 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
SND1-207ENST00000468621 MT1MQ8N339 61 aa1.86□□□□□ -2.11
SND1-207ENST00000468621 KRTAP4-3Q9BYR4 195 aa1.83□□□□□ -2.12
SND1-207ENST00000468621 KRTAP5-4Q6L8H1 288 aa1.77□□□□□ -2.13
SND1-207ENST00000468621 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
SND1-207ENST00000468621 KRTAP12-4P60329 112 aa1.69□□□□□ -2.14
SND1-207ENST00000468621 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
SND1-207ENST00000468621 SYNE1Q8NF91 8797 aaKnown RBP1.66□□□□□ -2.14
SND1-207ENST00000468621 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
SND1-207ENST00000468621 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
SND1-207ENST00000468621 MT1AP04731 61 aa1.63□□□□□ -2.15
SND1-207ENST00000468621 KRTAP6-1Q3LI64 71 aa1.6□□□□□ -2.15
SND1-207ENST00000468621 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
SND1-207ENST00000468621 OBSCNQ5VST9 7968 aa1.58□□□□□ -2.16
SND1-207ENST00000468621 LCE3EQ5T5B0 92 aa1.57□□□□□ -2.16
SND1-207ENST00000468621 LCE3DQ9BYE3 92 aa1.57□□□□□ -2.16
SND1-207ENST00000468621 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
SND1-207ENST00000468621 LCE1EQ5T753 118 aa1.52□□□□□ -2.17
SND1-207ENST00000468621 PRM1P04553 51 aa1.51□□□□□ -2.17
SND1-207ENST00000468621 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
SND1-207ENST00000468621 MT3P25713 68 aa1.44□□□□□ -2.18
SND1-207ENST00000468621 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
SND1-207ENST00000468621 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
SND1-207ENST00000468621 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
SND1-207ENST00000468621 LCE1CQ5T751 118 aa1.24□□□□□ -2.21
SND1-207ENST00000468621 LCE1BQ5T7P3 118 aa1.24□□□□□ -2.21
SND1-207ENST00000468621 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
SND1-207ENST00000468621 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
SND1-207ENST00000468621 MUC19Q7Z5P9 8384 aa0.99□□□□□ -2.25
SND1-207ENST00000468621 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
SND1-207ENST00000468621 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 65.7 ms