RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 ABCC1P33527 1531 aa-4.24□□□□□ -3.09
SSB-208ENST00000468600 TFF3Q07654 80 aa-4.24□□□□□ -3.09
SSB-208ENST00000468600 LINC01549A6NIU2 74 aa-4.28□□□□□ -3.09
SSB-208ENST00000468600 IGIPA6NJ69 53 aa-4.28□□□□□ -3.09
SSB-208ENST00000468600 TOMM7Q9P0U1 55 aa-4.28□□□□□ -3.09
SSB-208ENST00000468600 PEG3Q9GZU2 1588 aa-4.29□□□□□ -3.1
SSB-208ENST00000468600 HILPDAQ9Y5L2 63 aa-4.3□□□□□ -3.1
SSB-208ENST00000468600 C18orf32Q8TCD1 76 aa-4.31□□□□□ -3.1
SSB-208ENST00000468600 PKIAP61925 76 aa-4.32□□□□□ -3.1
SSB-208ENST00000468600 V9GYS6 101 aa-4.32□□□□□ -3.1
SSB-208ENST00000468600 UGGT1Q9NYU2 1555 aa-4.34□□□□□ -3.1
SSB-208ENST00000468600 S100A13Q99584 98 aa-4.34□□□□□ -3.1
SSB-208ENST00000468600 RB1CC1Q8TDY2 1594 aa-4.35□□□□□ -3.11
SSB-208ENST00000468600 PDCD5O14737 125 aa-4.35□□□□□ -3.11
SSB-208ENST00000468600 ABCA8O94911 1581 aa-4.36□□□□□ -3.11
SSB-208ENST00000468600 AGLP35573 1532 aa-4.36□□□□□ -3.11
SSB-208ENST00000468600 DEFB124Q8NES8 71 aa-4.36□□□□□ -3.11
SSB-208ENST00000468600 DDX60Q8IY21 1712 aaKnown RBP-4.36□□□□□ -3.11
SSB-208ENST00000468600 CFAP74Q9C0B2 1584 aa-4.37□□□□□ -3.11
SSB-208ENST00000468600 NFAT5O94916 1531 aa-4.4□□□□□ -3.11
SSB-208ENST00000468600 DUOX2Q9NRD8 1548 aa-4.4□□□□□ -3.11
SSB-208ENST00000468600 DEFB104AQ8WTQ1 72 aa-4.4□□□□□ -3.11
SSB-208ENST00000468600 ABCA6Q8N139 1617 aa-4.42□□□□□ -3.12
SSB-208ENST00000468600 PLNP26678 52 aa-4.42□□□□□ -3.12
SSB-208ENST00000468600 LINC01556Q5JQF7 62 aa-4.43□□□□□ -3.12
SSB-208ENST00000468600 TRPM2O94759 1503 aa-4.45□□□□□ -3.12
SSB-208ENST00000468600 DCAF1Q9Y4B6 1507 aa-4.45□□□□□ -3.12
SSB-208ENST00000468600 CLTCL1P53675 1640 aa-4.46□□□□□ -3.12
SSB-208ENST00000468600 UTRNP46939 3433 aa-4.5□□□□□ -3.13
SSB-208ENST00000468600 ABCA9Q8IUA7 1624 aa-4.51□□□□□ -3.13
SSB-208ENST00000468600 PRXQ9BXM0 1461 aa-4.56□□□□□ -3.14
SSB-208ENST00000468600 CPS1P31327 1500 aa-4.58□□□□□ -3.14
SSB-208ENST00000468600 NDUFA1O15239 70 aa-4.59□□□□□ -3.14
SSB-208ENST00000468600 ADCY10Q96PN6 1610 aa-4.6□□□□□ -3.15
SSB-208ENST00000468600 ABCA5Q8WWZ7 1642 aa-4.64□□□□□ -3.15
SSB-208ENST00000468600 DUOX1Q9NRD9 1551 aa-4.74□□□□□ -3.17
SSB-208ENST00000468600 SMCO4Q9NRQ5 59 aa-4.77□□□□□ -3.17
SSB-208ENST00000468600 IQGAP3Q86VI3 1631 aa-4.77□□□□□ -3.17
SSB-208ENST00000468600 UGGT2Q9NYU1 1516 aa-4.78□□□□□ -3.17
SSB-208ENST00000468600 IQGAP1P46940 1657 aa-4.79□□□□□ -3.18
SSB-208ENST00000468600 TOP2AP11388 1531 aaKnown RBP-4.8□□□□□ -3.18
SSB-208ENST00000468600 H3BUX3 64 aa-4.8□□□□□ -3.18
SSB-208ENST00000468600 CCDC18Q5T9S5 1454 aa-4.85□□□□□ -3.19
SSB-208ENST00000468600 RPL39P62891 51 aaKnown RBP-4.85□□□□□ -3.19
SSB-208ENST00000468600 ERICH3Q5RHP9 1530 aa-4.86□□□□□ -3.19
SSB-208ENST00000468600 ABCA10Q8WWZ4 1543 aa-4.86□□□□□ -3.19
SSB-208ENST00000468600 APELAP0DMC3 54 aa-4.88□□□□□ -3.19
SSB-208ENST00000468600 A0A087WWC5 75 aa-4.92□□□□□ -3.2
SSB-208ENST00000468600 CMC2Q9NRP2 79 aa-4.92□□□□□ -3.2
SSB-208ENST00000468600 SAMD9LQ8IVG5 1584 aa-4.95□□□□□ -3.2
SSB-208ENST00000468600 FANCD2Q9BXW9 1451 aa-4.96□□□□□ -3.2
SSB-208ENST00000468600 GOLGB1Q14789 3259 aaKnown RBP-4.96□□□□□ -3.2
SSB-208ENST00000468600 GNG2P59768 71 aa-4.97□□□□□ -3.21
SSB-208ENST00000468600 RPL39LQ96EH5 51 aaKnown RBP-4.97□□□□□ -3.21
SSB-208ENST00000468600 A0A096LPF7 62 aa-4.98□□□□□ -3.21
SSB-208ENST00000468600 SMIM5Q71RC9 77 aa-4.98□□□□□ -3.21
SSB-208ENST00000468600 EFCAB5A4FU69 1503 aa-4.98□□□□□ -3.21
SSB-208ENST00000468600 ABCC8Q09428 1581 aa-4.99□□□□□ -3.21
SSB-208ENST00000468600 ATP7AQ04656 1500 aa-4.99□□□□□ -3.21
SSB-208ENST00000468600 HTN3P15516 51 aa-5.05□□□□□ -3.22
SSB-208ENST00000468600 MROH2BQ7Z745 1585 aa-5.16□□□□□ -3.23
SSB-208ENST00000468600 K7EIM0 57 aa-5.26□□□□□ -3.25
SSB-208ENST00000468600 PRCDQ00LT1 54 aa-5.27□□□□□ -3.25
SSB-208ENST00000468600 TMEM167AQ8TBQ9 72 aa-5.32□□□□□ -3.26
SSB-208ENST00000468600 H3BSH0 61 aa-5.38□□□□□ -3.27
SSB-208ENST00000468600 ARHGAP5-AS1Q96IT6 56 aa-5.39□□□□□ -3.27
SSB-208ENST00000468600 Q9Y3F1 56 aa-5.42□□□□□ -3.28
SSB-208ENST00000468600 SNRPGP15A8MWD9 76 aa-5.44□□□□□ -3.28
SSB-208ENST00000468600 IQGAP2Q13576 1575 aa-5.67□□□□□ -3.32
SSB-208ENST00000468600 COX14Q96I36 57 aa-5.68□□□□□ -3.32
SSB-208ENST00000468600 TOMM5Q8N4H5 51 aa-5.77□□□□□ -3.33
SSB-208ENST00000468600 SNRPGP62308 76 aaKnown RBP-5.81□□□□□ -3.34
SSB-208ENST00000468600 RPL39P5Q59GN2 51 aa-5.83□□□□□ -3.34
SSB-208ENST00000468600 SMIM31A0A1B0GVY4 71 aa-5.84□□□□□ -3.34
SSB-208ENST00000468600 DEFB108AA8MXU0 73 aa-5.85□□□□□ -3.35
SSB-208ENST00000468600 DEFB108BQ8NET1 73 aa-6.02□□□□□ -3.37
SSB-208ENST00000468600 GCC2Q8IWJ2 1684 aa-6.13□□□□□ -3.39
SSB-208ENST00000468600 STATHP02808 62 aa-6.2□□□□□ -3.4
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms