RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 ETDCA0A1B0GVM5 59 aa1.17□□□□□ -2.22
MSH2-205ENST00000467323 SMIM13P0DJ93 91 aa1.17□□□□□ -2.22
MSH2-205ENST00000467323 KRTAP5-2Q701N4 177 aa1.17□□□□□ -2.22
MSH2-205ENST00000467323 SMIM2Q9BVW6 85 aa1.17□□□□□ -2.22
MSH2-205ENST00000467323 SPRR2EP22531 72 aa1.15□□□□□ -2.23
MSH2-205ENST00000467323 SPRR2BP35325 72 aa1.15□□□□□ -2.23
MSH2-205ENST00000467323 SPRR2AP35326 72 aa1.15□□□□□ -2.23
MSH2-205ENST00000467323 UMAD1C9J7I0 102 aa1.14□□□□□ -2.23
MSH2-205ENST00000467323 LINC00158P58513 81 aa1.14□□□□□ -2.23
MSH2-205ENST00000467323 KRTAP2-1Q9BYU5 128 aa1.14□□□□□ -2.23
MSH2-205ENST00000467323 CRIPTQ9P021 101 aa1.14□□□□□ -2.23
MSH2-205ENST00000467323 IGIPA6NJ69 53 aa1.13□□□□□ -2.23
MSH2-205ENST00000467323 K7EQZ3 153 aa1.13□□□□□ -2.23
MSH2-205ENST00000467323 COX7BP24311 80 aa1.13□□□□□ -2.23
MSH2-205ENST00000467323 SPRR1AP35321 89 aa1.13□□□□□ -2.23
MSH2-205ENST00000467323 DEFB105AQ8NG35 78 aa1.13□□□□□ -2.23
MSH2-205ENST00000467323 KCNQ1DNQ9H478 68 aa1.13□□□□□ -2.23
MSH2-205ENST00000467323 MUC12Q9UKN1 5478 aa1.13□□□□□ -2.23
MSH2-205ENST00000467323 COX8AP10176 69 aa1.12□□□□□ -2.23
MSH2-205ENST00000467323 S100ZQ8WXG8 99 aa1.12□□□□□ -2.23
MSH2-205ENST00000467323 SPRR2FQ96RM1 72 aa1.12□□□□□ -2.23
MSH2-205ENST00000467323 SPRR2DP22532 72 aa1.11□□□□□ -2.23
MSH2-205ENST00000467323 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
MSH2-205ENST00000467323 SMIM27A0A1W2PRY6 76 aa1.1□□□□□ -2.23
MSH2-205ENST00000467323 MT1BP07438 61 aa1.09□□□□□ -2.23
MSH2-205ENST00000467323 SPRR1BP22528 89 aa1.09□□□□□ -2.23
MSH2-205ENST00000467323 KMT2DO14686 5537 aa1.08□□□□□ -2.24
MSH2-205ENST00000467323 GPR98Q8WXG9 6306 aa1.07□□□□□ -2.24
MSH2-205ENST00000467323 K7EMI3 77 aa1.05□□□□□ -2.24
MSH2-205ENST00000467323 KRTAP8-1Q8IUC2 63 aa1.05□□□□□ -2.24
MSH2-205ENST00000467323 NREPQ16612 68 aa1.04□□□□□ -2.24
MSH2-205ENST00000467323 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
MSH2-205ENST00000467323 WFDC13Q8IUB5 93 aa1.04□□□□□ -2.24
MSH2-205ENST00000467323 IGLV5-48A0A075B6I7 105 aa1.02□□□□□ -2.25
MSH2-205ENST00000467323 LINC01546A6NGU7 62 aa1.02□□□□□ -2.25
MSH2-205ENST00000467323 KRTAP19-8Q3LI54 63 aa1.02□□□□□ -2.25
MSH2-205ENST00000467323 MRPL34Q9BQ48 92 aaKnown RBP1.02□□□□□ -2.25
MSH2-205ENST00000467323 LINC01549A6NIU2 74 aa1.01□□□□□ -2.25
MSH2-205ENST00000467323 MT4P47944 62 aa1.01□□□□□ -2.25
MSH2-205ENST00000467323 LINC00308Q8TCZ7 52 aa1.01□□□□□ -2.25
MSH2-205ENST00000467323 MDN1Q9NU22 5596 aa1□□□□□ -2.25
MSH2-205ENST00000467323 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
MSH2-205ENST00000467323 H1FX-AS1Q4G0G2 97 aa1□□□□□ -2.25
MSH2-205ENST00000467323 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
MSH2-205ENST00000467323 KRTAP5-8O75690 187 aa0.99□□□□□ -2.25
MSH2-205ENST00000467323 SPRR2GQ9BYE4 73 aa0.99□□□□□ -2.25
MSH2-205ENST00000467323 MT1XP80297 61 aa0.98□□□□□ -2.25
MSH2-205ENST00000467323 C3orf79P0CE67 100 aa0.97□□□□□ -2.25
MSH2-205ENST00000467323 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
MSH2-205ENST00000467323 PLNP26678 52 aa0.95□□□□□ -2.26
MSH2-205ENST00000467323 ATXN8Q156A1 80 aa0.94□□□□□ -2.26
MSH2-205ENST00000467323 S4R3F8 94 aa0.94□□□□□ -2.26
MSH2-205ENST00000467323 DSTQ03001 7570 aaKnown RBP0.91□□□□□ -2.26
MSH2-205ENST00000467323 HMCN1Q96RW7 5635 aa0.9□□□□□ -2.27
MSH2-205ENST00000467323 H0YAA0 97 aa0.89□□□□□ -2.27
MSH2-205ENST00000467323 MMP24-AS1A0A0U1RRL7 71 aa0.88□□□□□ -2.27
MSH2-205ENST00000467323 MT1EP04732 61 aa0.87□□□□□ -2.27
MSH2-205ENST00000467323 H0YGX0 51 aa0.86□□□□□ -2.27
MSH2-205ENST00000467323 M0QZ58 72 aa0.86□□□□□ -2.27
MSH2-205ENST00000467323 KRTAP20-2Q3LI61 65 aa0.86□□□□□ -2.27
MSH2-205ENST00000467323 KRTAP19-7Q3SYF9 63 aa0.86□□□□□ -2.27
MSH2-205ENST00000467323 MT1MQ8N339 61 aa0.85□□□□□ -2.27
MSH2-205ENST00000467323 UBL5Q9BZL1 73 aa0.85□□□□□ -2.27
MSH2-205ENST00000467323 MT1GP13640 62 aa0.83□□□□□ -2.28
MSH2-205ENST00000467323 KRTAP19-5Q3LI72 72 aa0.83□□□□□ -2.28
MSH2-205ENST00000467323 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
MSH2-205ENST00000467323 MT1LQ93083 61 aa0.81□□□□□ -2.28
MSH2-205ENST00000467323 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
MSH2-205ENST00000467323 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.28
MSH2-205ENST00000467323 SYNE1Q8NF91 8797 aaKnown RBP0.77□□□□□ -2.29
MSH2-205ENST00000467323 KRTAP6-1Q3LI64 71 aa0.71□□□□□ -2.3
MSH2-205ENST00000467323 KRTAP6-2Q3LI66 62 aa0.71□□□□□ -2.3
MSH2-205ENST00000467323 MT1AP04731 61 aa0.68□□□□□ -2.3
MSH2-205ENST00000467323 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
MSH2-205ENST00000467323 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
MSH2-205ENST00000467323 TNP1P09430 55 aa0.63□□□□□ -2.31
MSH2-205ENST00000467323 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
MSH2-205ENST00000467323 PRM1P04553 51 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 69.1 ms