RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 KMT2DO14686 5537 aa2.57□□□□□ -2
PTCD3-207ENST00000467273 DEFB105AQ8NG35 78 aa2.56□□□□□ -2
PTCD3-207ENST00000467273 ZCCHC13Q8WW36 166 aaKnown RBP2.56□□□□□ -2
PTCD3-207ENST00000467273 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
PTCD3-207ENST00000467273 COX7BP24311 80 aa2.55□□□□□ -2
PTCD3-207ENST00000467273 UBL5Q9BZL1 73 aa2.53□□□□□ -2
PTCD3-207ENST00000467273 LINC00472Q9H8W2 130 aa2.52□□□□□ -2.01
PTCD3-207ENST00000467273 PLNP26678 52 aa2.51□□□□□ -2.01
PTCD3-207ENST00000467273 IGKV4-1P06312 121 aa2.5□□□□□ -2.01
PTCD3-207ENST00000467273 LOC110117498A0A087WWA1 95 aa2.49□□□□□ -2.01
PTCD3-207ENST00000467273 INE1O15225 51 aa2.48□□□□□ -2.01
PTCD3-207ENST00000467273 LINC00308Q8TCZ7 52 aa2.48□□□□□ -2.01
PTCD3-207ENST00000467273 SPRR2EP22531 72 aa2.47□□□□□ -2.01
PTCD3-207ENST00000467273 SPRR2BP35325 72 aa2.47□□□□□ -2.01
PTCD3-207ENST00000467273 SPRR2AP35326 72 aa2.47□□□□□ -2.01
PTCD3-207ENST00000467273 MT1BP07438 61 aa2.45□□□□□ -2.02
PTCD3-207ENST00000467273 ACYP2P14621 99 aa2.44□□□□□ -2.02
PTCD3-207ENST00000467273 COA5Q86WW8 74 aa2.44□□□□□ -2.02
PTCD3-207ENST00000467273 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
PTCD3-207ENST00000467273 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
PTCD3-207ENST00000467273 A0A1B0GU69 56 aa2.42□□□□□ -2.02
PTCD3-207ENST00000467273 Q6ZQY7 126 aa2.42□□□□□ -2.02
PTCD3-207ENST00000467273 LINC00575Q6W349 94 aa2.41□□□□□ -2.02
PTCD3-207ENST00000467273 SPRR2GQ9BYE4 73 aa2.41□□□□□ -2.02
PTCD3-207ENST00000467273 SPRR2DP22532 72 aa2.4□□□□□ -2.03
PTCD3-207ENST00000467273 H1FX-AS1Q4G0G2 97 aa2.4□□□□□ -2.03
PTCD3-207ENST00000467273 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
PTCD3-207ENST00000467273 WFDC13Q8IUB5 93 aa2.4□□□□□ -2.03
PTCD3-207ENST00000467273 SMIM11BQ8TCY0 68 aa2.4□□□□□ -2.03
PTCD3-207ENST00000467273 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
PTCD3-207ENST00000467273 H0YGX0 51 aa2.35□□□□□ -2.03
PTCD3-207ENST00000467273 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
PTCD3-207ENST00000467273 KRTAP8-1Q8IUC2 63 aa2.34□□□□□ -2.03
PTCD3-207ENST00000467273 PLAC4Q8WY50 150 aa2.33□□□□□ -2.04
PTCD3-207ENST00000467273 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
PTCD3-207ENST00000467273 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
PTCD3-207ENST00000467273 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
PTCD3-207ENST00000467273 CRIPTQ9P021 101 aa2.29□□□□□ -2.04
PTCD3-207ENST00000467273 MT1XP80297 61 aa2.22□□□□□ -2.05
PTCD3-207ENST00000467273 K7EQZ3 153 aa2.21□□□□□ -2.06
PTCD3-207ENST00000467273 S4R3F8 94 aa2.21□□□□□ -2.06
PTCD3-207ENST00000467273 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
PTCD3-207ENST00000467273 DSTQ03001 7570 aaKnown RBP2.18□□□□□ -2.06
PTCD3-207ENST00000467273 MRPL34Q9BQ48 92 aaKnown RBP2.18□□□□□ -2.06
PTCD3-207ENST00000467273 KRTAP13-4Q3LI77 160 aa2.15□□□□□ -2.07
PTCD3-207ENST00000467273 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
PTCD3-207ENST00000467273 MMP24-AS1A0A0U1RRL7 71 aa2.14□□□□□ -2.07
PTCD3-207ENST00000467273 H0YAA0 97 aa2.13□□□□□ -2.07
PTCD3-207ENST00000467273 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
PTCD3-207ENST00000467273 MT4P47944 62 aa2.09□□□□□ -2.07
PTCD3-207ENST00000467273 TP53AIP1Q9HCN2 124 aa2.08□□□□□ -2.08
PTCD3-207ENST00000467273 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
PTCD3-207ENST00000467273 KRTAP19-3Q7Z4W3 81 aa2.06□□□□□ -2.08
PTCD3-207ENST00000467273 C10orf95Q9H7T3 257 aa2.01□□□□□ -2.09
PTCD3-207ENST00000467273 MT1EP04732 61 aa1.99□□□□□ -2.09
PTCD3-207ENST00000467273 MT1GP13640 62 aa1.99□□□□□ -2.09
PTCD3-207ENST00000467273 KRTAP19-7Q3SYF9 63 aa1.99□□□□□ -2.09
PTCD3-207ENST00000467273 M0QZ58 72 aa1.97□□□□□ -2.09
PTCD3-207ENST00000467273 KRTAP12-1P59990 96 aa1.93□□□□□ -2.1
PTCD3-207ENST00000467273 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
PTCD3-207ENST00000467273 MT1MQ8N339 61 aa1.92□□□□□ -2.1
PTCD3-207ENST00000467273 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
PTCD3-207ENST00000467273 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
PTCD3-207ENST00000467273 MT1LQ93083 61 aa1.85□□□□□ -2.11
PTCD3-207ENST00000467273 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
PTCD3-207ENST00000467273 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
PTCD3-207ENST00000467273 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
PTCD3-207ENST00000467273 A0A0D9SG42 100 aa1.8□□□□□ -2.12
PTCD3-207ENST00000467273 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
PTCD3-207ENST00000467273 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
PTCD3-207ENST00000467273 TNP1P09430 55 aa1.61□□□□□ -2.15
PTCD3-207ENST00000467273 MT1AP04731 61 aa1.58□□□□□ -2.16
PTCD3-207ENST00000467273 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
PTCD3-207ENST00000467273 KRTAP6-2Q3LI66 62 aa1.56□□□□□ -2.16
PTCD3-207ENST00000467273 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
PTCD3-207ENST00000467273 PRM1P04553 51 aa1.19□□□□□ -2.22
PTCD3-207ENST00000467273 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
PTCD3-207ENST00000467273 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 84.2 ms