RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 VPS13CQ709C8 3753 aa-1.14□□□□□ -2.59
PRPF40A-205ENST00000467114 MYO15AQ9UKN7 3530 aa-1.15□□□□□ -2.59
PRPF40A-205ENST00000467114 SNRPGP15A8MWD9 76 aa-1.16□□□□□ -2.6
PRPF40A-205ENST00000467114 FREM2Q5SZK8 3169 aa-1.18□□□□□ -2.6
PRPF40A-205ENST00000467114 FRYLO94915 3013 aa-1.19□□□□□ -2.6
PRPF40A-205ENST00000467114 ABCA13Q86UQ4 5058 aa-1.21□□□□□ -2.6
PRPF40A-205ENST00000467114 MT1BP07438 61 aa-1.22□□□□□ -2.6
PRPF40A-205ENST00000467114 TOMM7Q9P0U1 55 aa-1.24□□□□□ -2.61
PRPF40A-205ENST00000467114 CEP250Q9BV73 2442 aa-1.25□□□□□ -2.61
PRPF40A-205ENST00000467114 PCNTO95613 3336 aa-1.27□□□□□ -2.61
PRPF40A-205ENST00000467114 RPS29P62273 56 aaKnown RBP-1.27□□□□□ -2.61
PRPF40A-205ENST00000467114 BOD1L1Q8NFC6 3051 aa-1.29□□□□□ -2.62
PRPF40A-205ENST00000467114 DMDP11532 3685 aa-1.3□□□□□ -2.62
PRPF40A-205ENST00000467114 WDFY3Q8IZQ1 3526 aa-1.31□□□□□ -2.62
PRPF40A-205ENST00000467114 CEP350Q5VT06 3117 aa-1.32□□□□□ -2.62
PRPF40A-205ENST00000467114 IQGAP2Q13576 1575 aa-1.32□□□□□ -2.62
PRPF40A-205ENST00000467114 RPL39P62891 51 aaKnown RBP-1.32□□□□□ -2.62
PRPF40A-205ENST00000467114 TOMM5Q8N4H5 51 aa-1.32□□□□□ -2.62
PRPF40A-205ENST00000467114 WDFY4Q6ZS81 3184 aa-1.33□□□□□ -2.62
PRPF40A-205ENST00000467114 SZT2Q5T011 3432 aa-1.34□□□□□ -2.62
PRPF40A-205ENST00000467114 LINC01590Q5TEZ4 76 aa-1.35□□□□□ -2.63
PRPF40A-205ENST00000467114 SAMD9LQ8IVG5 1584 aa-1.36□□□□□ -2.63
PRPF40A-205ENST00000467114 DUOX1Q9NRD9 1551 aa-1.38□□□□□ -2.63
PRPF40A-205ENST00000467114 ATP7AQ04656 1500 aa-1.4□□□□□ -2.63
PRPF40A-205ENST00000467114 SPEGQ15772 3267 aa-1.4□□□□□ -2.63
PRPF40A-205ENST00000467114 RPL39LQ96EH5 51 aaKnown RBP-1.4□□□□□ -2.63
PRPF40A-205ENST00000467114 RHPN1-AS1Q9BWJ2 59 aa-1.4□□□□□ -2.63
PRPF40A-205ENST00000467114 DNAH12Q6ZR08 3092 aa-1.41□□□□□ -2.63
PRPF40A-205ENST00000467114 MT1FP04733 61 aa-1.41□□□□□ -2.64
PRPF40A-205ENST00000467114 MUC3AQ02505 3323 aa-1.41□□□□□ -2.64
PRPF40A-205ENST00000467114 A0A096LNI7 61 aa-1.43□□□□□ -2.64
PRPF40A-205ENST00000467114 KRTAP20-1Q3LI63 56 aa-1.46□□□□□ -2.64
PRPF40A-205ENST00000467114 DEFB133Q30KQ1 61 aa-1.47□□□□□ -2.64
PRPF40A-205ENST00000467114 MKI67P46013 3256 aaKnown RBP-1.49□□□□□ -2.65
PRPF40A-205ENST00000467114 HTN1P15515 57 aa-1.5□□□□□ -2.65
PRPF40A-205ENST00000467114 DEFB104AQ8WTQ1 72 aa-1.5□□□□□ -2.65
PRPF40A-205ENST00000467114 CENPEQ02224 2701 aa-1.51□□□□□ -2.65
PRPF40A-205ENST00000467114 EP400Q96L91 3159 aa-1.52□□□□□ -2.65
PRPF40A-205ENST00000467114 TTTY10Q9BZA0 68 aa-1.52□□□□□ -2.65
PRPF40A-205ENST00000467114 TOP2AP11388 1531 aaKnown RBP-1.52□□□□□ -2.65
PRPF40A-205ENST00000467114 XIRP2A4UGR9 3374 aa-1.54□□□□□ -2.66
PRPF40A-205ENST00000467114 MROH2BQ7Z745 1585 aa-1.54□□□□□ -2.66
PRPF40A-205ENST00000467114 DCHS1Q96JQ0 3298 aa-1.57□□□□□ -2.66
PRPF40A-205ENST00000467114 DEFB124Q8NES8 71 aa-1.6□□□□□ -2.67
PRPF40A-205ENST00000467114 LOC400499M0QZD8 3231 aa-1.61□□□□□ -2.67
PRPF40A-205ENST00000467114 USP34Q70CQ2 3546 aa-1.61□□□□□ -2.67
PRPF40A-205ENST00000467114 CFAP47Q6ZTR5 3102 aa-1.63□□□□□ -2.67
PRPF40A-205ENST00000467114 CD52P31358 61 aa-1.64□□□□□ -2.67
PRPF40A-205ENST00000467114 UNC80Q8N2C7 3258 aa-1.66□□□□□ -2.67
PRPF40A-205ENST00000467114 DNAH14Q0VDD8 3507 aa-1.69□□□□□ -2.68
PRPF40A-205ENST00000467114 KRTAP19-6Q3LI70 58 aa-1.69□□□□□ -2.68
PRPF40A-205ENST00000467114 ASPMQ8IZT6 3477 aa-1.7□□□□□ -2.68
PRPF40A-205ENST00000467114 H3BUX3 64 aa-1.76□□□□□ -2.69
PRPF40A-205ENST00000467114 SNRPGP62308 76 aaKnown RBP-1.76□□□□□ -2.69
PRPF40A-205ENST00000467114 BRCA2P51587 3418 aa-1.77□□□□□ -2.69
PRPF40A-205ENST00000467114 K7EIM0 57 aa-1.78□□□□□ -2.69
PRPF40A-205ENST00000467114 KRTAP19-2Q3LHN2 52 aa-1.79□□□□□ -2.7
PRPF40A-205ENST00000467114 GCC2Q8IWJ2 1684 aa-1.81□□□□□ -2.7
PRPF40A-205ENST00000467114 LINC01556Q5JQF7 62 aa-1.82□□□□□ -2.7
PRPF40A-205ENST00000467114 ARHGAP5-AS1Q96IT6 56 aa-1.82□□□□□ -2.7
PRPF40A-205ENST00000467114 PRCDQ00LT1 54 aa-1.86□□□□□ -2.71
PRPF40A-205ENST00000467114 VCANP13611 3396 aa-1.89□□□□□ -2.71
PRPF40A-205ENST00000467114 CENPFP49454 3210 aa-1.91□□□□□ -2.72
PRPF40A-205ENST00000467114 CDH23Q9H251 3354 aa-1.93□□□□□ -2.72
PRPF40A-205ENST00000467114 APELAP0DMC3 54 aa-1.97□□□□□ -2.72
PRPF40A-205ENST00000467114 A0A096LPF7 62 aa-1.98□□□□□ -2.73
PRPF40A-205ENST00000467114 TMEM167AQ8TBQ9 72 aa-2□□□□□ -2.73
PRPF40A-205ENST00000467114 VPS13AQ96RL7 3174 aa-2.01□□□□□ -2.73
PRPF40A-205ENST00000467114 H3BSH0 61 aa-2.01□□□□□ -2.73
PRPF40A-205ENST00000467114 RPL39P5Q59GN2 51 aa-2.07□□□□□ -2.74
PRPF40A-205ENST00000467114 DEFB108AA8MXU0 73 aa-2.13□□□□□ -2.75
PRPF40A-205ENST00000467114 HTN3P15516 51 aa-2.19□□□□□ -2.76
PRPF40A-205ENST00000467114 UTRNP46939 3433 aa-2.2□□□□□ -2.76
PRPF40A-205ENST00000467114 Q9Y3F1 56 aa-2.35□□□□□ -2.79
PRPF40A-205ENST00000467114 GOLGB1Q14789 3259 aaKnown RBP-2.39□□□□□ -2.79
PRPF40A-205ENST00000467114 DEFB108BQ8NET1 73 aa-2.49□□□□□ -2.81
PRPF40A-205ENST00000467114 COX14Q96I36 57 aa-2.55□□□□□ -2.82
PRPF40A-205ENST00000467114 STATHP02808 62 aa-2.8□□□□□ -2.86
Retrieved 78 of 20,778 RNA–protein pairs in 1094.7 ms