RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 KRTAP12-2P59991 146 aa6.16□□□□□ -1.42
HMGXB4-206ENST00000466438 MT1XP80297 61 aa6.14□□□□□ -1.43
HMGXB4-206ENST00000466438 SPATA8Q6RVD6 105 aa6.13□□□□□ -1.43
HMGXB4-206ENST00000466438 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
HMGXB4-206ENST00000466438 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
HMGXB4-206ENST00000466438 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
HMGXB4-206ENST00000466438 LINC01554Q52M75 96 aa6.04□□□□□ -1.44
HMGXB4-206ENST00000466438 A0A0D9SG42 100 aa6.03□□□□□ -1.44
HMGXB4-206ENST00000466438 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
HMGXB4-206ENST00000466438 A8MU10 97 aa6.01□□□□□ -1.45
HMGXB4-206ENST00000466438 K7ERS5 55 aa6□□□□□ -1.45
HMGXB4-206ENST00000466438 AHNAK2Q8IVF2 5795 aa6□□□□□ -1.45
HMGXB4-206ENST00000466438 KRTAP5-10Q6L8G5 202 aa5.96□□□□□ -1.46
HMGXB4-206ENST00000466438 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
HMGXB4-206ENST00000466438 PRO0628Q9UI54 55 aa5.92□□□□□ -1.46
HMGXB4-206ENST00000466438 KRTAP12-1P59990 96 aa5.9□□□□□ -1.46
HMGXB4-206ENST00000466438 PLAC4Q8WY50 150 aa5.9□□□□□ -1.46
HMGXB4-206ENST00000466438 KRTAP5-7Q6L8G8 165 aa5.84□□□□□ -1.47
HMGXB4-206ENST00000466438 KRTAP10-7P60409 375 aaPredicted RBP5.83□□□□□ -1.48
HMGXB4-206ENST00000466438 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
HMGXB4-206ENST00000466438 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
HMGXB4-206ENST00000466438 MT4P47944 62 aa5.8□□□□□ -1.48
HMGXB4-206ENST00000466438 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
HMGXB4-206ENST00000466438 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
HMGXB4-206ENST00000466438 ROMO1P60602 79 aa5.65□□□□□ -1.5
HMGXB4-206ENST00000466438 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
HMGXB4-206ENST00000466438 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
HMGXB4-206ENST00000466438 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
HMGXB4-206ENST00000466438 TNP1P09430 55 aa5.51□□□□□ -1.53
HMGXB4-206ENST00000466438 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
HMGXB4-206ENST00000466438 KRTAP5-4Q6L8H1 288 aa5.51□□□□□ -1.53
HMGXB4-206ENST00000466438 KTN1-AS1Q86SY8 53 aa5.51□□□□□ -1.53
HMGXB4-206ENST00000466438 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
HMGXB4-206ENST00000466438 MT1EP04732 61 aa5.49□□□□□ -1.53
HMGXB4-206ENST00000466438 MT1GP13640 62 aa5.39□□□□□ -1.55
HMGXB4-206ENST00000466438 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
HMGXB4-206ENST00000466438 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
HMGXB4-206ENST00000466438 MT1MQ8N339 61 aa5.28□□□□□ -1.56
HMGXB4-206ENST00000466438 KRTAP20-2Q3LI61 65 aa5.25□□□□□ -1.57
HMGXB4-206ENST00000466438 AHNAKQ09666 5890 aaKnown RBP5.24□□□□□ -1.57
HMGXB4-206ENST00000466438 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
HMGXB4-206ENST00000466438 MT3P25713 68 aa5.21□□□□□ -1.58
HMGXB4-206ENST00000466438 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
HMGXB4-206ENST00000466438 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
HMGXB4-206ENST00000466438 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
HMGXB4-206ENST00000466438 MT1LQ93083 61 aa5.11□□□□□ -1.59
HMGXB4-206ENST00000466438 MUC5BQ9HC84 5762 aaPredicted RBP5.05□□□□□ -1.6
HMGXB4-206ENST00000466438 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
HMGXB4-206ENST00000466438 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
HMGXB4-206ENST00000466438 KRTAP12-4P60329 112 aa5□□□□□ -1.61
HMGXB4-206ENST00000466438 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
HMGXB4-206ENST00000466438 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
HMGXB4-206ENST00000466438 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
HMGXB4-206ENST00000466438 LCE1FQ5T754 118 aa4.82□□□□□ -1.64
HMGXB4-206ENST00000466438 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
HMGXB4-206ENST00000466438 KRTAP5-2Q701N4 177 aa4.69□□□□□ -1.66
HMGXB4-206ENST00000466438 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
HMGXB4-206ENST00000466438 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
HMGXB4-206ENST00000466438 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
HMGXB4-206ENST00000466438 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
HMGXB4-206ENST00000466438 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
HMGXB4-206ENST00000466438 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
HMGXB4-206ENST00000466438 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
HMGXB4-206ENST00000466438 MT1AP04731 61 aa4.34□□□□□ -1.71
HMGXB4-206ENST00000466438 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
HMGXB4-206ENST00000466438 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
HMGXB4-206ENST00000466438 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
HMGXB4-206ENST00000466438 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
HMGXB4-206ENST00000466438 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
HMGXB4-206ENST00000466438 INE1O15225 51 aa3.55□□□□□ -1.84
HMGXB4-206ENST00000466438 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
HMGXB4-206ENST00000466438 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
HMGXB4-206ENST00000466438 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
HMGXB4-206ENST00000466438 PRM1P04553 51 aa2.91□□□□□ -1.94
HMGXB4-206ENST00000466438 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
HMGXB4-206ENST00000466438 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
HMGXB4-206ENST00000466438 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
HMGXB4-206ENST00000466438 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms