RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
CXCR4-203ENST00000466288 ADM2Q7Z4H4 148 aa5.98□□□□□ -1.45
CXCR4-203ENST00000466288 M0QZ58 72 aa5.97□□□□□ -1.45
CXCR4-203ENST00000466288 K7ERS5 55 aa5.96□□□□□ -1.45
CXCR4-203ENST00000466288 P0C880 135 aa5.93□□□□□ -1.46
CXCR4-203ENST00000466288 KTN1-AS1Q86SY8 53 aa5.9□□□□□ -1.46
CXCR4-203ENST00000466288 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
CXCR4-203ENST00000466288 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
CXCR4-203ENST00000466288 R4GN34 69 aa5.8□□□□□ -1.48
CXCR4-203ENST00000466288 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
CXCR4-203ENST00000466288 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
CXCR4-203ENST00000466288 A0A0D9SG42 100 aa5.76□□□□□ -1.49
CXCR4-203ENST00000466288 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
CXCR4-203ENST00000466288 KRTAP12-1P59990 96 aa5.71□□□□□ -1.49
CXCR4-203ENST00000466288 ROMO1P60602 79 aa5.68□□□□□ -1.5
CXCR4-203ENST00000466288 SPINT4Q6UDR6 99 aa5.65□□□□□ -1.5
CXCR4-203ENST00000466288 HMCN1Q96RW7 5635 aa5.64□□□□□ -1.51
CXCR4-203ENST00000466288 AHNAK2Q8IVF2 5795 aa5.62□□□□□ -1.51
CXCR4-203ENST00000466288 LINC01554Q52M75 96 aa5.6□□□□□ -1.51
CXCR4-203ENST00000466288 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
CXCR4-203ENST00000466288 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
CXCR4-203ENST00000466288 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
CXCR4-203ENST00000466288 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
CXCR4-203ENST00000466288 KRTAP5-10Q6L8G5 202 aa5.49□□□□□ -1.53
CXCR4-203ENST00000466288 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
CXCR4-203ENST00000466288 MT4P47944 62 aa5.46□□□□□ -1.53
CXCR4-203ENST00000466288 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
CXCR4-203ENST00000466288 CAMK2N1Q7Z7J9 78 aa5.45□□□□□ -1.54
CXCR4-203ENST00000466288 MT1EP04732 61 aa5.41□□□□□ -1.54
CXCR4-203ENST00000466288 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
CXCR4-203ENST00000466288 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
CXCR4-203ENST00000466288 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
CXCR4-203ENST00000466288 MT1GP13640 62 aa5.27□□□□□ -1.57
CXCR4-203ENST00000466288 KRTAP5-4Q6L8H1 288 aa5.27□□□□□ -1.57
CXCR4-203ENST00000466288 TNP1P09430 55 aa5.26□□□□□ -1.57
CXCR4-203ENST00000466288 MT1MQ8N339 61 aa5.19□□□□□ -1.58
CXCR4-203ENST00000466288 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
CXCR4-203ENST00000466288 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
CXCR4-203ENST00000466288 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
CXCR4-203ENST00000466288 MT1LQ93083 61 aa5.07□□□□□ -1.6
CXCR4-203ENST00000466288 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
CXCR4-203ENST00000466288 LCE3AQ5TA76 89 aa4.9□□□□□ -1.62
CXCR4-203ENST00000466288 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
CXCR4-203ENST00000466288 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
CXCR4-203ENST00000466288 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
CXCR4-203ENST00000466288 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
CXCR4-203ENST00000466288 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
CXCR4-203ENST00000466288 MUC5BQ9HC84 5762 aaPredicted RBP4.71□□□□□ -1.66
CXCR4-203ENST00000466288 MUC5ACP98088 5654 aa4.71□□□□□ -1.66
CXCR4-203ENST00000466288 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
CXCR4-203ENST00000466288 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
CXCR4-203ENST00000466288 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
CXCR4-203ENST00000466288 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
CXCR4-203ENST00000466288 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
CXCR4-203ENST00000466288 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
CXCR4-203ENST00000466288 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
CXCR4-203ENST00000466288 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
CXCR4-203ENST00000466288 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
CXCR4-203ENST00000466288 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
CXCR4-203ENST00000466288 MT1AP04731 61 aa4.3□□□□□ -1.72
CXCR4-203ENST00000466288 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
CXCR4-203ENST00000466288 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
CXCR4-203ENST00000466288 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
CXCR4-203ENST00000466288 MT3P25713 68 aa4.13□□□□□ -1.75
CXCR4-203ENST00000466288 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
CXCR4-203ENST00000466288 INE1O15225 51 aa3.92□□□□□ -1.78
CXCR4-203ENST00000466288 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
CXCR4-203ENST00000466288 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
CXCR4-203ENST00000466288 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.84
CXCR4-203ENST00000466288 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
CXCR4-203ENST00000466288 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
CXCR4-203ENST00000466288 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
CXCR4-203ENST00000466288 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
CXCR4-203ENST00000466288 PRM1P04553 51 aa2.91□□□□□ -1.94
CXCR4-203ENST00000466288 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
CXCR4-203ENST00000466288 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
CXCR4-203ENST00000466288 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
CXCR4-203ENST00000466288 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 66.5 ms