RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
RTF1-202ENST00000462276 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
RTF1-202ENST00000462276 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
RTF1-202ENST00000462276 KMT2DO14686 5537 aa4.18□□□□□ -1.74
RTF1-202ENST00000462276 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
RTF1-202ENST00000462276 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
RTF1-202ENST00000462276 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
RTF1-202ENST00000462276 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
RTF1-202ENST00000462276 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
RTF1-202ENST00000462276 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
RTF1-202ENST00000462276 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
RTF1-202ENST00000462276 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
RTF1-202ENST00000462276 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
RTF1-202ENST00000462276 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
RTF1-202ENST00000462276 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
RTF1-202ENST00000462276 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
RTF1-202ENST00000462276 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.78
RTF1-202ENST00000462276 MT1EP04732 61 aa3.92□□□□□ -1.78
RTF1-202ENST00000462276 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
RTF1-202ENST00000462276 SPRR2EP22531 72 aa3.84□□□□□ -1.79
RTF1-202ENST00000462276 SPRR2BP35325 72 aa3.84□□□□□ -1.79
RTF1-202ENST00000462276 SPRR2AP35326 72 aa3.84□□□□□ -1.79
RTF1-202ENST00000462276 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
RTF1-202ENST00000462276 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
RTF1-202ENST00000462276 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
RTF1-202ENST00000462276 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
RTF1-202ENST00000462276 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
RTF1-202ENST00000462276 MT1GP13640 62 aa3.81□□□□□ -1.8
RTF1-202ENST00000462276 MT1LQ93083 61 aa3.81□□□□□ -1.8
RTF1-202ENST00000462276 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.81
RTF1-202ENST00000462276 SVIPQ8NHG7 77 aa3.73□□□□□ -1.81
RTF1-202ENST00000462276 SPRR2DP22532 72 aa3.71□□□□□ -1.82
RTF1-202ENST00000462276 MT1MQ8N339 61 aa3.69□□□□□ -1.82
RTF1-202ENST00000462276 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
RTF1-202ENST00000462276 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
RTF1-202ENST00000462276 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
RTF1-202ENST00000462276 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
RTF1-202ENST00000462276 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
RTF1-202ENST00000462276 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
RTF1-202ENST00000462276 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
RTF1-202ENST00000462276 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
RTF1-202ENST00000462276 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
RTF1-202ENST00000462276 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
RTF1-202ENST00000462276 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
RTF1-202ENST00000462276 MT4P47944 62 aa3.27□□□□□ -1.89
RTF1-202ENST00000462276 MT1AP04731 61 aa3.26□□□□□ -1.89
RTF1-202ENST00000462276 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
RTF1-202ENST00000462276 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
RTF1-202ENST00000462276 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
RTF1-202ENST00000462276 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
RTF1-202ENST00000462276 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
RTF1-202ENST00000462276 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
RTF1-202ENST00000462276 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
RTF1-202ENST00000462276 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
RTF1-202ENST00000462276 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
RTF1-202ENST00000462276 MT3P25713 68 aa3□□□□□ -1.93
RTF1-202ENST00000462276 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
RTF1-202ENST00000462276 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
RTF1-202ENST00000462276 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
RTF1-202ENST00000462276 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
RTF1-202ENST00000462276 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
RTF1-202ENST00000462276 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
RTF1-202ENST00000462276 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
RTF1-202ENST00000462276 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
RTF1-202ENST00000462276 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
RTF1-202ENST00000462276 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
RTF1-202ENST00000462276 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
RTF1-202ENST00000462276 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
RTF1-202ENST00000462276 INE1O15225 51 aa2.58□□□□□ -2
RTF1-202ENST00000462276 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
RTF1-202ENST00000462276 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
RTF1-202ENST00000462276 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
RTF1-202ENST00000462276 PRM1P04553 51 aa2.17□□□□□ -2.06
RTF1-202ENST00000462276 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
RTF1-202ENST00000462276 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
RTF1-202ENST00000462276 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
RTF1-202ENST00000462276 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
RTF1-202ENST00000462276 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 78.1 ms