RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SNRPGP15A8MWD9 76 aa0.37□□□□□ -2.35
HDAC6-212ENST00000461608 IAPPP10997 89 aa0.37□□□□□ -2.35
HDAC6-212ENST00000461608 HTN1P15515 57 aa0.37□□□□□ -2.35
HDAC6-212ENST00000461608 DEFB1P60022 68 aa0.37□□□□□ -2.35
HDAC6-212ENST00000461608 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
HDAC6-212ENST00000461608 TNXBP22105 4242 aa0.37□□□□□ -2.35
HDAC6-212ENST00000461608 PKHD1L1Q86WI1 4243 aa0.37□□□□□ -2.35
HDAC6-212ENST00000461608 DNAH8Q96JB1 4490 aa0.36□□□□□ -2.35
HDAC6-212ENST00000461608 LPAP08519 4548 aa0.36□□□□□ -2.35
HDAC6-212ENST00000461608 SERF2P84101 59 aa0.36□□□□□ -2.35
HDAC6-212ENST00000461608 NEBP20929 6669 aa0.36□□□□□ -2.35
HDAC6-212ENST00000461608 A0A096LNI7 61 aa0.35□□□□□ -2.35
HDAC6-212ENST00000461608 MT1HP80294 61 aa0.35□□□□□ -2.35
HDAC6-212ENST00000461608 KMT2DO14686 5537 aa0.35□□□□□ -2.35
HDAC6-212ENST00000461608 GPR98Q8WXG9 6306 aa0.34□□□□□ -2.35
HDAC6-212ENST00000461608 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.35
HDAC6-212ENST00000461608 M0R2T5 61 aa0.34□□□□□ -2.36
HDAC6-212ENST00000461608 KRTAP19-2Q3LHN2 52 aa0.34□□□□□ -2.36
HDAC6-212ENST00000461608 KRTAP20-1Q3LI63 56 aa0.34□□□□□ -2.36
HDAC6-212ENST00000461608 LINC00308Q8TCZ7 52 aa0.34□□□□□ -2.36
HDAC6-212ENST00000461608 C6orf48Q9UBA6 75 aa0.34□□□□□ -2.36
HDAC6-212ENST00000461608 MACF1Q9UPN3 7388 aaKnown RBP0.33□□□□□ -2.36
HDAC6-212ENST00000461608 MUC17Q685J3 4493 aa0.33□□□□□ -2.36
HDAC6-212ENST00000461608 PLNP26678 52 aa0.33□□□□□ -2.36
HDAC6-212ENST00000461608 RPS29P62273 56 aaKnown RBP0.33□□□□□ -2.36
HDAC6-212ENST00000461608 KRTAP19-6Q3LI70 58 aa0.33□□□□□ -2.36
HDAC6-212ENST00000461608 CLPSL2Q6UWE3 100 aa0.33□□□□□ -2.36
HDAC6-212ENST00000461608 H0YGX0 51 aa0.32□□□□□ -2.36
HDAC6-212ENST00000461608 M0QY20 66 aa0.32□□□□□ -2.36
HDAC6-212ENST00000461608 NDUFA1O15239 70 aa0.32□□□□□ -2.36
HDAC6-212ENST00000461608 MT2AP02795 61 aa0.32□□□□□ -2.36
HDAC6-212ENST00000461608 PRM1P04553 51 aa0.32□□□□□ -2.36
HDAC6-212ENST00000461608 MUC5BQ9HC84 5762 aaPredicted RBP0.32□□□□□ -2.36
HDAC6-212ENST00000461608 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
HDAC6-212ENST00000461608 MT1FP04733 61 aa0.31□□□□□ -2.36
HDAC6-212ENST00000461608 PRLHP81277 87 aa0.31□□□□□ -2.36
HDAC6-212ENST00000461608 TOMM5Q8N4H5 51 aa0.31□□□□□ -2.36
HDAC6-212ENST00000461608 TMEM167BQ9NRX6 74 aa0.31□□□□□ -2.36
HDAC6-212ENST00000461608 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
HDAC6-212ENST00000461608 FLGP20930 4061 aaPredicted RBP0.31□□□□□ -2.36
HDAC6-212ENST00000461608 POLR2KP53803 58 aaKnown RBP0.3□□□□□ -2.36
HDAC6-212ENST00000461608 RPL39LQ96EH5 51 aaKnown RBP0.3□□□□□ -2.36
HDAC6-212ENST00000461608 S4R3F8 94 aa0.3□□□□□ -2.36
HDAC6-212ENST00000461608 SMIM27A0A1W2PRY6 76 aa0.29□□□□□ -2.36
HDAC6-212ENST00000461608 C9orf92A6NGG3 77 aa0.29□□□□□ -2.36
HDAC6-212ENST00000461608 SPRR2EP22531 72 aa0.29□□□□□ -2.36
HDAC6-212ENST00000461608 SPRR2BP35325 72 aa0.29□□□□□ -2.36
HDAC6-212ENST00000461608 SPRR2AP35326 72 aa0.29□□□□□ -2.36
HDAC6-212ENST00000461608 TOMM7Q9P0U1 55 aa0.29□□□□□ -2.36
HDAC6-212ENST00000461608 SPRR2DP22532 72 aa0.28□□□□□ -2.36
HDAC6-212ENST00000461608 RPL39P62891 51 aaKnown RBP0.28□□□□□ -2.36
HDAC6-212ENST00000461608 SPRR2FQ96RM1 72 aa0.28□□□□□ -2.36
HDAC6-212ENST00000461608 SMIM2Q9BVW6 85 aa0.28□□□□□ -2.36
HDAC6-212ENST00000461608 AHNAKQ09666 5890 aaKnown RBP0.28□□□□□ -2.36
HDAC6-212ENST00000461608 MT1BP07438 61 aa0.27□□□□□ -2.37
HDAC6-212ENST00000461608 KRTAP19-8Q3LI54 63 aa0.27□□□□□ -2.37
HDAC6-212ENST00000461608 KRTAP8-1Q8IUC2 63 aa0.27□□□□□ -2.37
HDAC6-212ENST00000461608 SPRR2GQ9BYE4 73 aa0.27□□□□□ -2.37
HDAC6-212ENST00000461608 IGLV5-48A0A075B6I7 105 aa0.26□□□□□ -2.37
HDAC6-212ENST00000461608 LINC01546A6NGU7 62 aa0.26□□□□□ -2.37
HDAC6-212ENST00000461608 SYNE1Q8NF91 8797 aaKnown RBP0.26□□□□□ -2.37
HDAC6-212ENST00000461608 MT4P47944 62 aa0.24□□□□□ -2.37
HDAC6-212ENST00000461608 MT1XP80297 61 aa0.24□□□□□ -2.37
HDAC6-212ENST00000461608 DSTQ03001 7570 aaKnown RBP0.24□□□□□ -2.37
HDAC6-212ENST00000461608 MUC5ACP98088 5654 aa0.24□□□□□ -2.37
HDAC6-212ENST00000461608 MT1GP13640 62 aa0.23□□□□□ -2.37
HDAC6-212ENST00000461608 MT1EP04732 61 aa0.22□□□□□ -2.37
HDAC6-212ENST00000461608 KRTAP20-2Q3LI61 65 aa0.22□□□□□ -2.37
HDAC6-212ENST00000461608 KRTAP19-7Q3SYF9 63 aa0.22□□□□□ -2.37
HDAC6-212ENST00000461608 MT1MQ8N339 61 aa0.21□□□□□ -2.38
HDAC6-212ENST00000461608 MMP24-AS1A0A0U1RRL7 71 aa0.2□□□□□ -2.38
HDAC6-212ENST00000461608 M0QZ58 72 aa0.2□□□□□ -2.38
HDAC6-212ENST00000461608 KRTAP19-5Q3LI72 72 aa0.2□□□□□ -2.38
HDAC6-212ENST00000461608 MT1LQ93083 61 aa0.2□□□□□ -2.38
HDAC6-212ENST00000461608 MT1AP04731 61 aa0.18□□□□□ -2.38
HDAC6-212ENST00000461608 KRTAP6-2Q3LI66 62 aa0.17□□□□□ -2.38
HDAC6-212ENST00000461608 TNP1P09430 55 aa0.16□□□□□ -2.38
HDAC6-212ENST00000461608 KRTAP6-1Q3LI64 71 aa0.16□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms