RNA–Protein interactions for RNA: ENST00000461294.2

PDGFRA-202, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-202ENST00000461294 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
PDGFRA-202ENST00000461294 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
PDGFRA-202ENST00000461294 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
PDGFRA-202ENST00000461294 TNP1P09430 55 aa3.29□□□□□ -1.88
PDGFRA-202ENST00000461294 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
PDGFRA-202ENST00000461294 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
PDGFRA-202ENST00000461294 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
PDGFRA-202ENST00000461294 MT4P47944 62 aa3.24□□□□□ -1.89
PDGFRA-202ENST00000461294 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
PDGFRA-202ENST00000461294 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
PDGFRA-202ENST00000461294 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
PDGFRA-202ENST00000461294 ROMO1P60602 79 aa3.21□□□□□ -1.9
PDGFRA-202ENST00000461294 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
PDGFRA-202ENST00000461294 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.91
PDGFRA-202ENST00000461294 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
PDGFRA-202ENST00000461294 PP632Q6XCG6 107 aa3.11□□□□□ -1.91
PDGFRA-202ENST00000461294 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
PDGFRA-202ENST00000461294 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
PDGFRA-202ENST00000461294 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
PDGFRA-202ENST00000461294 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
PDGFRA-202ENST00000461294 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
PDGFRA-202ENST00000461294 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
PDGFRA-202ENST00000461294 MT1EP04732 61 aa3.07□□□□□ -1.92
PDGFRA-202ENST00000461294 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
PDGFRA-202ENST00000461294 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
PDGFRA-202ENST00000461294 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
PDGFRA-202ENST00000461294 LOC100996750A0A140TA64 210 aa2.99□□□□□ -1.93
PDGFRA-202ENST00000461294 MT1GP13640 62 aa2.98□□□□□ -1.93
PDGFRA-202ENST00000461294 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
PDGFRA-202ENST00000461294 MT1LQ93083 61 aa2.97□□□□□ -1.93
PDGFRA-202ENST00000461294 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
PDGFRA-202ENST00000461294 H3BS24 57 aa2.95□□□□□ -1.94
PDGFRA-202ENST00000461294 KRTAP15-1Q3LI76 137 aa2.94□□□□□ -1.94
PDGFRA-202ENST00000461294 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
PDGFRA-202ENST00000461294 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
PDGFRA-202ENST00000461294 MT1MQ8N339 61 aa2.9□□□□□ -1.95
PDGFRA-202ENST00000461294 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
PDGFRA-202ENST00000461294 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
PDGFRA-202ENST00000461294 PRAC1Q96KF2 57 aa2.84□□□□□ -1.95
PDGFRA-202ENST00000461294 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
PDGFRA-202ENST00000461294 KRTAP4-7Q9BYR0 210 aa2.82□□□□□ -1.96
PDGFRA-202ENST00000461294 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
PDGFRA-202ENST00000461294 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
PDGFRA-202ENST00000461294 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
PDGFRA-202ENST00000461294 KRTAP12-4P60329 112 aa2.72□□□□□ -1.97
PDGFRA-202ENST00000461294 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
PDGFRA-202ENST00000461294 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
PDGFRA-202ENST00000461294 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
PDGFRA-202ENST00000461294 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
PDGFRA-202ENST00000461294 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
PDGFRA-202ENST00000461294 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
PDGFRA-202ENST00000461294 MT1AP04731 61 aa2.55□□□□□ -2
PDGFRA-202ENST00000461294 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
PDGFRA-202ENST00000461294 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
PDGFRA-202ENST00000461294 KRTAP9-4Q9BYQ2 154 aa2.48□□□□□ -2.01
PDGFRA-202ENST00000461294 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
PDGFRA-202ENST00000461294 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
PDGFRA-202ENST00000461294 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
PDGFRA-202ENST00000461294 MT3P25713 68 aa2.34□□□□□ -2.03
PDGFRA-202ENST00000461294 KRTAP6-2Q3LI66 62 aa2.34□□□□□ -2.03
PDGFRA-202ENST00000461294 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
PDGFRA-202ENST00000461294 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
PDGFRA-202ENST00000461294 LCE1EQ5T753 118 aa2.1□□□□□ -2.07
PDGFRA-202ENST00000461294 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
PDGFRA-202ENST00000461294 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
PDGFRA-202ENST00000461294 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
PDGFRA-202ENST00000461294 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
PDGFRA-202ENST00000461294 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
PDGFRA-202ENST00000461294 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
PDGFRA-202ENST00000461294 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
PDGFRA-202ENST00000461294 INE1O15225 51 aa1.85□□□□□ -2.11
PDGFRA-202ENST00000461294 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
PDGFRA-202ENST00000461294 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
PDGFRA-202ENST00000461294 PRM1P04553 51 aa1.62□□□□□ -2.15
PDGFRA-202ENST00000461294 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
PDGFRA-202ENST00000461294 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
PDGFRA-202ENST00000461294 KRTAP4-4Q9BYR3 166 aa1.47□□□□□ -2.17
PDGFRA-202ENST00000461294 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 100.1 ms