RNA–Protein interactions for RNA: ENST00000456049.1

VSTM2A-OT1-201, VSTM2A overlapping transcript 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A-OT1, Length 3,031 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-OT1-201ENST00000456049 CRCT1Q9UGL9 99 aa1.45□□□□□ -2.18
VSTM2A-OT1-201ENST00000456049 R4GN34 69 aa1.45□□□□□ -2.18
VSTM2A-OT1-201ENST00000456049 C10orf95Q9H7T3 257 aa1.45□□□□□ -2.18
VSTM2A-OT1-201ENST00000456049 M0R2T5 61 aa1.44□□□□□ -2.18
VSTM2A-OT1-201ENST00000456049 MT1FP04733 61 aa1.44□□□□□ -2.18
VSTM2A-OT1-201ENST00000456049 MT2AP02795 61 aa1.42□□□□□ -2.18
VSTM2A-OT1-201ENST00000456049 ROMO1P60602 79 aa1.42□□□□□ -2.18
VSTM2A-OT1-201ENST00000456049 KRTAP12-1P59990 96 aa1.42□□□□□ -2.18
VSTM2A-OT1-201ENST00000456049 MUC12Q9UKN1 5478 aa1.42□□□□□ -2.18
VSTM2A-OT1-201ENST00000456049 KRTAP25-1Q3LHN0 102 aa1.41□□□□□ -2.18
VSTM2A-OT1-201ENST00000456049 CAMK2N1Q7Z7J9 78 aa1.4□□□□□ -2.19
VSTM2A-OT1-201ENST00000456049 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
VSTM2A-OT1-201ENST00000456049 KRTAP10-10P60014 251 aa1.37□□□□□ -2.19
VSTM2A-OT1-201ENST00000456049 MT3P25713 68 aa1.36□□□□□ -2.19
VSTM2A-OT1-201ENST00000456049 MUC5ACP98088 5654 aa1.34□□□□□ -2.2
VSTM2A-OT1-201ENST00000456049 OBSCNQ5VST9 7968 aa1.33□□□□□ -2.2
VSTM2A-OT1-201ENST00000456049 MT1BP07438 61 aa1.32□□□□□ -2.2
VSTM2A-OT1-201ENST00000456049 KRTAP20-1Q3LI63 56 aa1.32□□□□□ -2.2
VSTM2A-OT1-201ENST00000456049 PLAC4Q8WY50 150 aa1.32□□□□□ -2.2
VSTM2A-OT1-201ENST00000456049 LCE1AQ5T7P2 110 aa1.31□□□□□ -2.2
VSTM2A-OT1-201ENST00000456049 DSTQ03001 7570 aaKnown RBP1.3□□□□□ -2.2
VSTM2A-OT1-201ENST00000456049 NDUFAF8A1L188 74 aa1.29□□□□□ -2.2
VSTM2A-OT1-201ENST00000456049 TNP1P09430 55 aa1.29□□□□□ -2.2
VSTM2A-OT1-201ENST00000456049 KRTAP19-6Q3LI70 58 aa1.29□□□□□ -2.2
VSTM2A-OT1-201ENST00000456049 SPRR2GQ9BYE4 73 aa1.27□□□□□ -2.21
VSTM2A-OT1-201ENST00000456049 NEBP20929 6669 aa1.27□□□□□ -2.21
VSTM2A-OT1-201ENST00000456049 KRTAP6-3Q3LI67 103 aa1.26□□□□□ -2.21
VSTM2A-OT1-201ENST00000456049 KRTAP19-8Q3LI54 63 aa1.25□□□□□ -2.21
VSTM2A-OT1-201ENST00000456049 MT1XP80297 61 aa1.24□□□□□ -2.21
VSTM2A-OT1-201ENST00000456049 LCE3AQ5TA76 89 aa1.24□□□□□ -2.21
VSTM2A-OT1-201ENST00000456049 KRTAP10-5P60370 271 aa1.23□□□□□ -2.21
VSTM2A-OT1-201ENST00000456049 PP632Q6XCG6 107 aa1.23□□□□□ -2.21
VSTM2A-OT1-201ENST00000456049 KRTAP2-3P0C7H8 128 aa1.21□□□□□ -2.22
VSTM2A-OT1-201ENST00000456049 LUZP6Q538Z0 58 aa1.21□□□□□ -2.22
VSTM2A-OT1-201ENST00000456049 KRTAP2-4Q9BYR9 128 aa1.21□□□□□ -2.22
VSTM2A-OT1-201ENST00000456049 KRTAP10-12P60413 245 aa1.19□□□□□ -2.22
VSTM2A-OT1-201ENST00000456049 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
VSTM2A-OT1-201ENST00000456049 KRTAP9-6A8MVA2 160 aa1.18□□□□□ -2.22
VSTM2A-OT1-201ENST00000456049 PRO2289Q9P1D8 64 aa1.18□□□□□ -2.22
VSTM2A-OT1-201ENST00000456049 KRTAP12-3P60328 96 aa1.17□□□□□ -2.22
VSTM2A-OT1-201ENST00000456049 SPRR2FQ96RM1 72 aa1.16□□□□□ -2.22
VSTM2A-OT1-201ENST00000456049 KRTAP19-5Q3LI72 72 aa1.15□□□□□ -2.22
VSTM2A-OT1-201ENST00000456049 KRTAP8-1Q8IUC2 63 aa1.15□□□□□ -2.23
VSTM2A-OT1-201ENST00000456049 KRTAP2-2Q9BYT5 123 aa1.15□□□□□ -2.23
VSTM2A-OT1-201ENST00000456049 SPRR2EP22531 72 aa1.12□□□□□ -2.23
VSTM2A-OT1-201ENST00000456049 SPRR2BP35325 72 aa1.12□□□□□ -2.23
VSTM2A-OT1-201ENST00000456049 SPRR2AP35326 72 aa1.12□□□□□ -2.23
VSTM2A-OT1-201ENST00000456049 KRTAP2-1Q9BYU5 128 aa1.12□□□□□ -2.23
VSTM2A-OT1-201ENST00000456049 KRTAP19-7Q3SYF9 63 aa1.12□□□□□ -2.23
VSTM2A-OT1-201ENST00000456049 SYNE1Q8NF91 8797 aaKnown RBP1.12□□□□□ -2.23
VSTM2A-OT1-201ENST00000456049 SPRR5A0A1B0GTR4 108 aa1.1□□□□□ -2.23
VSTM2A-OT1-201ENST00000456049 LCE3CQ5T5A8 94 aa1.08□□□□□ -2.24
VSTM2A-OT1-201ENST00000456049 MT1EP04732 61 aa1.08□□□□□ -2.24
VSTM2A-OT1-201ENST00000456049 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
VSTM2A-OT1-201ENST00000456049 SPRR2DP22532 72 aa1.07□□□□□ -2.24
VSTM2A-OT1-201ENST00000456049 LCE1FQ5T754 118 aa1.06□□□□□ -2.24
VSTM2A-OT1-201ENST00000456049 MT1LQ93083 61 aa1.05□□□□□ -2.24
VSTM2A-OT1-201ENST00000456049 INE1O15225 51 aa1.05□□□□□ -2.24
VSTM2A-OT1-201ENST00000456049 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
VSTM2A-OT1-201ENST00000456049 MT1GP13640 62 aa1.03□□□□□ -2.24
VSTM2A-OT1-201ENST00000456049 MT1MQ8N339 61 aa1.02□□□□□ -2.25
VSTM2A-OT1-201ENST00000456049 MT4P47944 62 aa1□□□□□ -2.25
VSTM2A-OT1-201ENST00000456049 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
VSTM2A-OT1-201ENST00000456049 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
VSTM2A-OT1-201ENST00000456049 KRTAP12-4P60329 112 aa0.9□□□□□ -2.27
VSTM2A-OT1-201ENST00000456049 MT1AP04731 61 aa0.87□□□□□ -2.27
VSTM2A-OT1-201ENST00000456049 LCE1CQ5T751 118 aa0.86□□□□□ -2.27
VSTM2A-OT1-201ENST00000456049 LCE1BQ5T7P3 118 aa0.86□□□□□ -2.27
VSTM2A-OT1-201ENST00000456049 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
VSTM2A-OT1-201ENST00000456049 LCE3EQ5T5B0 92 aa0.85□□□□□ -2.27
VSTM2A-OT1-201ENST00000456049 LCE3DQ9BYE3 92 aa0.85□□□□□ -2.27
VSTM2A-OT1-201ENST00000456049 PRM1P04553 51 aa0.79□□□□□ -2.28
VSTM2A-OT1-201ENST00000456049 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
VSTM2A-OT1-201ENST00000456049 MUC19Q7Z5P9 8384 aa0.7□□□□□ -2.3
VSTM2A-OT1-201ENST00000456049 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
VSTM2A-OT1-201ENST00000456049 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
VSTM2A-OT1-201ENST00000456049 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms