RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 ATP7AQ04656 1500 aa-1.64□□□□□ -2.67
HMGN3P1-201ENST00000453847 MT2AP02795 61 aa-1.64□□□□□ -2.67
HMGN3P1-201ENST00000453847 ITPR2Q14571 2701 aa-1.65□□□□□ -2.67
HMGN3P1-201ENST00000453847 TOMM5Q8N4H5 51 aa-1.67□□□□□ -2.68
HMGN3P1-201ENST00000453847 FRYLO94915 3013 aa-1.73□□□□□ -2.69
HMGN3P1-201ENST00000453847 SAMD9LQ8IVG5 1584 aa-1.74□□□□□ -2.69
HMGN3P1-201ENST00000453847 ATMQ13315 3056 aa-1.75□□□□□ -2.69
HMGN3P1-201ENST00000453847 TOMM7Q9P0U1 55 aa-1.77□□□□□ -2.69
HMGN3P1-201ENST00000453847 CEP250Q9BV73 2442 aa-1.78□□□□□ -2.69
HMGN3P1-201ENST00000453847 FREM2Q5SZK8 3169 aa-1.8□□□□□ -2.7
HMGN3P1-201ENST00000453847 DUOX1Q9NRD9 1551 aa-1.81□□□□□ -2.7
HMGN3P1-201ENST00000453847 RPL39P62891 51 aaKnown RBP-1.81□□□□□ -2.7
HMGN3P1-201ENST00000453847 DMDP11532 3685 aa-1.82□□□□□ -2.7
HMGN3P1-201ENST00000453847 ABCA13Q86UQ4 5058 aa-1.84□□□□□ -2.7
HMGN3P1-201ENST00000453847 PCNTO95613 3336 aa-1.85□□□□□ -2.71
HMGN3P1-201ENST00000453847 MT1BP07438 61 aa-1.89□□□□□ -2.71
HMGN3P1-201ENST00000453847 WDFY4Q6ZS81 3184 aa-1.9□□□□□ -2.71
HMGN3P1-201ENST00000453847 TOP2AP11388 1531 aaKnown RBP-1.91□□□□□ -2.71
HMGN3P1-201ENST00000453847 WDFY3Q8IZQ1 3526 aa-1.92□□□□□ -2.72
HMGN3P1-201ENST00000453847 CEP350Q5VT06 3117 aa-1.93□□□□□ -2.72
HMGN3P1-201ENST00000453847 LINC01590Q5TEZ4 76 aa-1.93□□□□□ -2.72
HMGN3P1-201ENST00000453847 RPL39LQ96EH5 51 aaKnown RBP-1.94□□□□□ -2.72
HMGN3P1-201ENST00000453847 SZT2Q5T011 3432 aa-1.95□□□□□ -2.72
HMGN3P1-201ENST00000453847 MUC3AQ02505 3323 aa-1.97□□□□□ -2.73
HMGN3P1-201ENST00000453847 RPS29P62273 56 aaKnown RBP-1.98□□□□□ -2.73
HMGN3P1-201ENST00000453847 MROH2BQ7Z745 1585 aa-1.98□□□□□ -2.73
HMGN3P1-201ENST00000453847 DNAH12Q6ZR08 3092 aa-2.05□□□□□ -2.74
HMGN3P1-201ENST00000453847 BOD1L1Q8NFC6 3051 aa-2.06□□□□□ -2.74
HMGN3P1-201ENST00000453847 RHPN1-AS1Q9BWJ2 59 aa-2.08□□□□□ -2.74
HMGN3P1-201ENST00000453847 XIRP2A4UGR9 3374 aa-2.11□□□□□ -2.75
HMGN3P1-201ENST00000453847 SPEGQ15772 3267 aa-2.13□□□□□ -2.75
HMGN3P1-201ENST00000453847 A0A096LNI7 61 aa-2.17□□□□□ -2.76
HMGN3P1-201ENST00000453847 DEFB104AQ8WTQ1 72 aa-2.18□□□□□ -2.76
HMGN3P1-201ENST00000453847 MKI67P46013 3256 aaKnown RBP-2.18□□□□□ -2.76
HMGN3P1-201ENST00000453847 MT1FP04733 61 aa-2.2□□□□□ -2.76
HMGN3P1-201ENST00000453847 DEFB133Q30KQ1 61 aa-2.23□□□□□ -2.77
HMGN3P1-201ENST00000453847 EP400Q96L91 3159 aa-2.27□□□□□ -2.77
HMGN3P1-201ENST00000453847 GCC2Q8IWJ2 1684 aa-2.28□□□□□ -2.77
HMGN3P1-201ENST00000453847 HTN1P15515 57 aa-2.29□□□□□ -2.78
HMGN3P1-201ENST00000453847 CENPEQ02224 2701 aa-2.29□□□□□ -2.78
HMGN3P1-201ENST00000453847 DCHS1Q96JQ0 3298 aa-2.29□□□□□ -2.78
HMGN3P1-201ENST00000453847 DEFB124Q8NES8 71 aa-2.32□□□□□ -2.78
HMGN3P1-201ENST00000453847 KRTAP20-1Q3LI63 56 aa-2.35□□□□□ -2.79
HMGN3P1-201ENST00000453847 SNRPGP62308 76 aaKnown RBP-2.36□□□□□ -2.79
HMGN3P1-201ENST00000453847 LOC400499M0QZD8 3231 aa-2.36□□□□□ -2.79
HMGN3P1-201ENST00000453847 USP34Q70CQ2 3546 aa-2.38□□□□□ -2.79
HMGN3P1-201ENST00000453847 TTTY10Q9BZA0 68 aa-2.44□□□□□ -2.8
HMGN3P1-201ENST00000453847 ASPMQ8IZT6 3477 aa-2.45□□□□□ -2.8
HMGN3P1-201ENST00000453847 UNC80Q8N2C7 3258 aa-2.46□□□□□ -2.8
HMGN3P1-201ENST00000453847 CFAP47Q6ZTR5 3102 aa-2.46□□□□□ -2.8
HMGN3P1-201ENST00000453847 K7EIM0 57 aa-2.53□□□□□ -2.81
HMGN3P1-201ENST00000453847 CD52P31358 61 aa-2.53□□□□□ -2.81
HMGN3P1-201ENST00000453847 DNAH14Q0VDD8 3507 aa-2.57□□□□□ -2.82
HMGN3P1-201ENST00000453847 H3BUX3 64 aa-2.57□□□□□ -2.82
HMGN3P1-201ENST00000453847 ARHGAP5-AS1Q96IT6 56 aa-2.59□□□□□ -2.82
HMGN3P1-201ENST00000453847 BRCA2P51587 3418 aa-2.62□□□□□ -2.83
HMGN3P1-201ENST00000453847 PRCDQ00LT1 54 aa-2.64□□□□□ -2.83
HMGN3P1-201ENST00000453847 KRTAP19-2Q3LHN2 52 aa-2.67□□□□□ -2.84
HMGN3P1-201ENST00000453847 KRTAP19-6Q3LI70 58 aa-2.76□□□□□ -2.85
HMGN3P1-201ENST00000453847 VCANP13611 3396 aa-2.77□□□□□ -2.85
HMGN3P1-201ENST00000453847 LINC01556Q5JQF7 62 aa-2.78□□□□□ -2.85
HMGN3P1-201ENST00000453847 CENPFP49454 3210 aa-2.87□□□□□ -2.87
HMGN3P1-201ENST00000453847 TMEM167AQ8TBQ9 72 aa-2.89□□□□□ -2.87
HMGN3P1-201ENST00000453847 H3BSH0 61 aa-2.94□□□□□ -2.88
HMGN3P1-201ENST00000453847 CDH23Q9H251 3354 aa-2.96□□□□□ -2.88
HMGN3P1-201ENST00000453847 A0A096LPF7 62 aa-3.03□□□□□ -2.89
HMGN3P1-201ENST00000453847 RPL39P5Q59GN2 51 aa-3.04□□□□□ -2.9
HMGN3P1-201ENST00000453847 APELAP0DMC3 54 aa-3.05□□□□□ -2.9
HMGN3P1-201ENST00000453847 VPS13AQ96RL7 3174 aa-3.06□□□□□ -2.9
HMGN3P1-201ENST00000453847 DEFB108AA8MXU0 73 aa-3.16□□□□□ -2.92
HMGN3P1-201ENST00000453847 UTRNP46939 3433 aa-3.22□□□□□ -2.92
HMGN3P1-201ENST00000453847 HTN3P15516 51 aa-3.42□□□□□ -2.96
HMGN3P1-201ENST00000453847 GOLGB1Q14789 3259 aaKnown RBP-3.51□□□□□ -2.97
HMGN3P1-201ENST00000453847 Q9Y3F1 56 aa-3.57□□□□□ -2.98
HMGN3P1-201ENST00000453847 DEFB108BQ8NET1 73 aa-3.82□□□□□ -3.02
HMGN3P1-201ENST00000453847 COX14Q96I36 57 aa-3.91□□□□□ -3.04
HMGN3P1-201ENST00000453847 STATHP02808 62 aa-4.25□□□□□ -3.09
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms