RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
GARNL3-210ENST00000453030 A0A1B0GU33 70 aa4.49□□□□□ -1.69
GARNL3-210ENST00000453030 SPATA8Q6RVD6 105 aa4.45□□□□□ -1.7
GARNL3-210ENST00000453030 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
GARNL3-210ENST00000453030 A6NED7 52 aa4.41□□□□□ -1.7
GARNL3-210ENST00000453030 UQCR11O14957 56 aa4.41□□□□□ -1.7
GARNL3-210ENST00000453030 A0A0D9SG42 100 aa4.39□□□□□ -1.71
GARNL3-210ENST00000453030 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
GARNL3-210ENST00000453030 CAMK2N1Q7Z7J9 78 aa4.39□□□□□ -1.71
GARNL3-210ENST00000453030 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
GARNL3-210ENST00000453030 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
GARNL3-210ENST00000453030 A8MU10 97 aa4.37□□□□□ -1.71
GARNL3-210ENST00000453030 MT1EP04732 61 aa4.37□□□□□ -1.71
GARNL3-210ENST00000453030 MIR22HGQ0VDD5 57 aa4.37□□□□□ -1.71
GARNL3-210ENST00000453030 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
GARNL3-210ENST00000453030 SPINT4Q6UDR6 99 aa4.3□□□□□ -1.72
GARNL3-210ENST00000453030 HMCN1Q96RW7 5635 aa4.3□□□□□ -1.72
GARNL3-210ENST00000453030 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
GARNL3-210ENST00000453030 CDC42SE1Q9NRR8 79 aa4.27□□□□□ -1.73
GARNL3-210ENST00000453030 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
GARNL3-210ENST00000453030 MT4P47944 62 aa4.24□□□□□ -1.73
GARNL3-210ENST00000453030 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
GARNL3-210ENST00000453030 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
GARNL3-210ENST00000453030 MT1GP13640 62 aa4.21□□□□□ -1.74
GARNL3-210ENST00000453030 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
GARNL3-210ENST00000453030 K7ERS5 55 aa4.18□□□□□ -1.74
GARNL3-210ENST00000453030 MT1MQ8N339 61 aa4.18□□□□□ -1.74
GARNL3-210ENST00000453030 MT1LQ93083 61 aa4.14□□□□□ -1.75
GARNL3-210ENST00000453030 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
GARNL3-210ENST00000453030 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
GARNL3-210ENST00000453030 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
GARNL3-210ENST00000453030 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
GARNL3-210ENST00000453030 PRO0628Q9UI54 55 aa4.06□□□□□ -1.76
GARNL3-210ENST00000453030 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
GARNL3-210ENST00000453030 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
GARNL3-210ENST00000453030 ROMO1P60602 79 aa3.99□□□□□ -1.77
GARNL3-210ENST00000453030 TNP1P09430 55 aa3.96□□□□□ -1.78
GARNL3-210ENST00000453030 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
GARNL3-210ENST00000453030 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
GARNL3-210ENST00000453030 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
GARNL3-210ENST00000453030 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
GARNL3-210ENST00000453030 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
GARNL3-210ENST00000453030 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
GARNL3-210ENST00000453030 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
GARNL3-210ENST00000453030 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
GARNL3-210ENST00000453030 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
GARNL3-210ENST00000453030 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
GARNL3-210ENST00000453030 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
GARNL3-210ENST00000453030 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
GARNL3-210ENST00000453030 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.85
GARNL3-210ENST00000453030 MT3P25713 68 aa3.52□□□□□ -1.85
GARNL3-210ENST00000453030 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
GARNL3-210ENST00000453030 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
GARNL3-210ENST00000453030 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
GARNL3-210ENST00000453030 MT1AP04731 61 aa3.51□□□□□ -1.85
GARNL3-210ENST00000453030 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
GARNL3-210ENST00000453030 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
GARNL3-210ENST00000453030 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
GARNL3-210ENST00000453030 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
GARNL3-210ENST00000453030 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
GARNL3-210ENST00000453030 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
GARNL3-210ENST00000453030 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
GARNL3-210ENST00000453030 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
GARNL3-210ENST00000453030 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
GARNL3-210ENST00000453030 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
GARNL3-210ENST00000453030 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
GARNL3-210ENST00000453030 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
GARNL3-210ENST00000453030 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
GARNL3-210ENST00000453030 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
GARNL3-210ENST00000453030 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
GARNL3-210ENST00000453030 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
GARNL3-210ENST00000453030 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
GARNL3-210ENST00000453030 INE1O15225 51 aa2.38□□□□□ -2.03
GARNL3-210ENST00000453030 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
GARNL3-210ENST00000453030 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
GARNL3-210ENST00000453030 PRM1P04553 51 aa2.1□□□□□ -2.07
GARNL3-210ENST00000453030 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
GARNL3-210ENST00000453030 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 111 ms