RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 C8orf17Q9NRJ1 99 aa2.1□□□□□ -2.07
GTF3C3-207ENST00000451088 RPL37P61927 97 aaKnown RBP2.09□□□□□ -2.07
GTF3C3-207ENST00000451088 WFDC13Q8IUB5 93 aa2.09□□□□□ -2.07
GTF3C3-207ENST00000451088 FLGP20930 4061 aaPredicted RBP2.09□□□□□ -2.08
GTF3C3-207ENST00000451088 A8MUU9 505 aa2.08□□□□□ -2.08
GTF3C3-207ENST00000451088 Q5W150 140 aa2.08□□□□□ -2.08
GTF3C3-207ENST00000451088 LINC00472Q9H8W2 130 aa2.07□□□□□ -2.08
GTF3C3-207ENST00000451088 MMP24-AS1A0A0U1RRL7 71 aa2.05□□□□□ -2.08
GTF3C3-207ENST00000451088 NEBP20929 6669 aa2.04□□□□□ -2.08
GTF3C3-207ENST00000451088 A0A0G2JQZ4 141 aa2.04□□□□□ -2.08
GTF3C3-207ENST00000451088 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
GTF3C3-207ENST00000451088 DEFB116Q30KQ4 102 aa2.04□□□□□ -2.08
GTF3C3-207ENST00000451088 CAMK2N1Q7Z7J9 78 aa2.04□□□□□ -2.08
GTF3C3-207ENST00000451088 Q96NJ1 140 aa2.04□□□□□ -2.08
GTF3C3-207ENST00000451088 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
GTF3C3-207ENST00000451088 KRTAP19-6Q3LI70 58 aa2.03□□□□□ -2.08
GTF3C3-207ENST00000451088 SPINT4Q6UDR6 99 aa2.02□□□□□ -2.09
GTF3C3-207ENST00000451088 A0A1B0GVX0 72 aa2□□□□□ -2.09
GTF3C3-207ENST00000451088 MRPL34Q9BQ48 92 aaKnown RBP2□□□□□ -2.09
GTF3C3-207ENST00000451088 KMT2DO14686 5537 aa1.99□□□□□ -2.09
GTF3C3-207ENST00000451088 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
GTF3C3-207ENST00000451088 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
GTF3C3-207ENST00000451088 MT2AP02795 61 aa1.96□□□□□ -2.1
GTF3C3-207ENST00000451088 H0YAA0 97 aa1.95□□□□□ -2.1
GTF3C3-207ENST00000451088 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
GTF3C3-207ENST00000451088 MT1FP04733 61 aa1.94□□□□□ -2.1
GTF3C3-207ENST00000451088 A0A1B0GU33 70 aa1.93□□□□□ -2.1
GTF3C3-207ENST00000451088 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
GTF3C3-207ENST00000451088 H1FX-AS1Q4G0G2 97 aa1.91□□□□□ -2.1
GTF3C3-207ENST00000451088 CRIPTQ9P021 101 aa1.9□□□□□ -2.11
GTF3C3-207ENST00000451088 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
GTF3C3-207ENST00000451088 PRO2289Q9P1D8 64 aa1.87□□□□□ -2.11
GTF3C3-207ENST00000451088 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
GTF3C3-207ENST00000451088 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
GTF3C3-207ENST00000451088 PLAC4Q8WY50 150 aa1.85□□□□□ -2.11
GTF3C3-207ENST00000451088 SPRR2EP22531 72 aa1.83□□□□□ -2.12
GTF3C3-207ENST00000451088 SPRR2BP35325 72 aa1.83□□□□□ -2.12
GTF3C3-207ENST00000451088 SPRR2AP35326 72 aa1.83□□□□□ -2.12
GTF3C3-207ENST00000451088 INE1O15225 51 aa1.8□□□□□ -2.12
GTF3C3-207ENST00000451088 S4R3F8 94 aa1.8□□□□□ -2.12
GTF3C3-207ENST00000451088 C10orf95Q9H7T3 257 aa1.79□□□□□ -2.12
GTF3C3-207ENST00000451088 SPRR2DP22532 72 aa1.77□□□□□ -2.13
GTF3C3-207ENST00000451088 SPRR2FQ96RM1 72 aa1.77□□□□□ -2.13
GTF3C3-207ENST00000451088 SPRR2GQ9BYE4 73 aa1.76□□□□□ -2.13
GTF3C3-207ENST00000451088 R4GN34 69 aa1.76□□□□□ -2.13
GTF3C3-207ENST00000451088 KRTAP19-8Q3LI54 63 aa1.74□□□□□ -2.13
GTF3C3-207ENST00000451088 MT1BP07438 61 aa1.72□□□□□ -2.13
GTF3C3-207ENST00000451088 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
GTF3C3-207ENST00000451088 KRTAP12-1P59990 96 aa1.69□□□□□ -2.14
GTF3C3-207ENST00000451088 DSTQ03001 7570 aaKnown RBP1.69□□□□□ -2.14
GTF3C3-207ENST00000451088 KRTAP13-4Q3LI77 160 aa1.68□□□□□ -2.14
GTF3C3-207ENST00000451088 A0A0D9SG42 100 aa1.67□□□□□ -2.14
GTF3C3-207ENST00000451088 M0QZ58 72 aa1.67□□□□□ -2.14
GTF3C3-207ENST00000451088 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
GTF3C3-207ENST00000451088 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
GTF3C3-207ENST00000451088 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
GTF3C3-207ENST00000451088 MT1XP80297 61 aa1.61□□□□□ -2.15
GTF3C3-207ENST00000451088 MT4P47944 62 aa1.59□□□□□ -2.15
GTF3C3-207ENST00000451088 TNP1P09430 55 aa1.48□□□□□ -2.17
GTF3C3-207ENST00000451088 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
GTF3C3-207ENST00000451088 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
GTF3C3-207ENST00000451088 MT1EP04732 61 aa1.44□□□□□ -2.18
GTF3C3-207ENST00000451088 KRTAP19-7Q3SYF9 63 aa1.43□□□□□ -2.18
GTF3C3-207ENST00000451088 MT1GP13640 62 aa1.42□□□□□ -2.18
GTF3C3-207ENST00000451088 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
GTF3C3-207ENST00000451088 KRTAP19-5Q3LI72 72 aa1.4□□□□□ -2.19
GTF3C3-207ENST00000451088 KRTAP20-2Q3LI61 65 aa1.39□□□□□ -2.19
GTF3C3-207ENST00000451088 MT1MQ8N339 61 aa1.38□□□□□ -2.19
GTF3C3-207ENST00000451088 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
GTF3C3-207ENST00000451088 MT1LQ93083 61 aa1.37□□□□□ -2.19
GTF3C3-207ENST00000451088 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
GTF3C3-207ENST00000451088 MT1AP04731 61 aa1.17□□□□□ -2.22
GTF3C3-207ENST00000451088 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
GTF3C3-207ENST00000451088 KRTAP6-2Q3LI66 62 aa1.12□□□□□ -2.23
GTF3C3-207ENST00000451088 PRM1P04553 51 aa1.03□□□□□ -2.24
GTF3C3-207ENST00000451088 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
GTF3C3-207ENST00000451088 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
GTF3C3-207ENST00000451088 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 1348.7 ms