RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 MT1XP80297 61 aa-0.4□□□□□ -2.47
PMS1-216ENST00000447734 MT1LQ93083 61 aa-0.4□□□□□ -2.47
PMS1-216ENST00000447734 WDFY4Q6ZS81 3184 aa-0.41□□□□□ -2.47
PMS1-216ENST00000447734 DEFB136Q30KP8 78 aa-0.41□□□□□ -2.48
PMS1-216ENST00000447734 DNAH17Q9UFH2 4485 aa-0.42□□□□□ -2.48
PMS1-216ENST00000447734 DYNC1H1Q14204 4646 aaKnown RBP-0.44□□□□□ -2.48
PMS1-216ENST00000447734 CENPEQ02224 2701 aa-0.47□□□□□ -2.48
PMS1-216ENST00000447734 UNC80Q8N2C7 3258 aa-0.47□□□□□ -2.49
PMS1-216ENST00000447734 DCHS1Q96JQ0 3298 aa-0.47□□□□□ -2.49
PMS1-216ENST00000447734 DEFB104AQ8WTQ1 72 aa-0.49□□□□□ -2.49
PMS1-216ENST00000447734 RHPN1-AS1Q9BWJ2 59 aa-0.5□□□□□ -2.49
PMS1-216ENST00000447734 TRRAPQ9Y4A5 3859 aa-0.5□□□□□ -2.49
PMS1-216ENST00000447734 LOC400499M0QZD8 3231 aa-0.51□□□□□ -2.49
PMS1-216ENST00000447734 CSMD2Q7Z408 3487 aa-0.51□□□□□ -2.49
PMS1-216ENST00000447734 DEFB4AO15263 64 aa-0.52□□□□□ -2.49
PMS1-216ENST00000447734 CFAP54Q96N23 3096 aa-0.53□□□□□ -2.5
PMS1-216ENST00000447734 ARHGAP5-AS1Q96IT6 56 aa-0.55□□□□□ -2.5
PMS1-216ENST00000447734 EYSQ5T1H1 3165 aa-0.55□□□□□ -2.5
PMS1-216ENST00000447734 BOD1L1Q8NFC6 3051 aa-0.56□□□□□ -2.5
PMS1-216ENST00000447734 CEP250Q9BV73 2442 aa-0.56□□□□□ -2.5
PMS1-216ENST00000447734 FREM2Q5SZK8 3169 aa-0.57□□□□□ -2.5
PMS1-216ENST00000447734 MT1HL1P0DM35 61 aa-0.57□□□□□ -2.5
PMS1-216ENST00000447734 DNAH5Q8TE73 4624 aa-0.57□□□□□ -2.5
PMS1-216ENST00000447734 SPEGQ15772 3267 aa-0.58□□□□□ -2.5
PMS1-216ENST00000447734 EP400Q96L91 3159 aa-0.59□□□□□ -2.5
PMS1-216ENST00000447734 A0A096LNI7 61 aa-0.59□□□□□ -2.5
PMS1-216ENST00000447734 SZT2Q5T011 3432 aa-0.6□□□□□ -2.5
PMS1-216ENST00000447734 MT1GP13640 62 aa-0.6□□□□□ -2.51
PMS1-216ENST00000447734 SMG1Q96Q15 3661 aaKnown RBP-0.6□□□□□ -2.51
PMS1-216ENST00000447734 MUC3AQ02505 3323 aa-0.6□□□□□ -2.51
PMS1-216ENST00000447734 PRUNE2Q8WUY3 3088 aa-0.62□□□□□ -2.51
PMS1-216ENST00000447734 MT1BP07438 61 aa-0.63□□□□□ -2.51
PMS1-216ENST00000447734 K7EIM0 57 aa-0.64□□□□□ -2.51
PMS1-216ENST00000447734 ATMQ13315 3056 aa-0.65□□□□□ -2.51
PMS1-216ENST00000447734 CEP350Q5VT06 3117 aa-0.65□□□□□ -2.51
PMS1-216ENST00000447734 PRCDQ00LT1 54 aa-0.65□□□□□ -2.51
PMS1-216ENST00000447734 CFAP47Q6ZTR5 3102 aa-0.65□□□□□ -2.51
PMS1-216ENST00000447734 VPS13CQ709C8 3753 aa-0.66□□□□□ -2.52
PMS1-216ENST00000447734 MKI67P46013 3256 aaKnown RBP-0.67□□□□□ -2.52
PMS1-216ENST00000447734 MT2AP02795 61 aa-0.68□□□□□ -2.52
PMS1-216ENST00000447734 DEFB133Q30KQ1 61 aa-0.68□□□□□ -2.52
PMS1-216ENST00000447734 MT1MQ8N339 61 aa-0.68□□□□□ -2.52
PMS1-216ENST00000447734 FRYLO94915 3013 aa-0.69□□□□□ -2.52
PMS1-216ENST00000447734 HTN1P15515 57 aa-0.69□□□□□ -2.52
PMS1-216ENST00000447734 PCNTO95613 3336 aa-0.69□□□□□ -2.52
PMS1-216ENST00000447734 VCANP13611 3396 aa-0.71□□□□□ -2.52
PMS1-216ENST00000447734 DEFB124Q8NES8 71 aa-0.73□□□□□ -2.53
PMS1-216ENST00000447734 USP34Q70CQ2 3546 aa-0.73□□□□□ -2.53
PMS1-216ENST00000447734 DMDP11532 3685 aa-0.74□□□□□ -2.53
PMS1-216ENST00000447734 H3BUX3 64 aa-0.74□□□□□ -2.53
PMS1-216ENST00000447734 TTTY10Q9BZA0 68 aa-0.74□□□□□ -2.53
PMS1-216ENST00000447734 DNAH14Q0VDD8 3507 aa-0.76□□□□□ -2.53
PMS1-216ENST00000447734 RPS29P62273 56 aaKnown RBP-0.76□□□□□ -2.53
PMS1-216ENST00000447734 MT1FP04733 61 aa-0.77□□□□□ -2.53
PMS1-216ENST00000447734 DNAH12Q6ZR08 3092 aa-0.77□□□□□ -2.53
PMS1-216ENST00000447734 CDH23Q9H251 3354 aa-0.79□□□□□ -2.54
PMS1-216ENST00000447734 H3BSH0 61 aa-0.8□□□□□ -2.54
PMS1-216ENST00000447734 VPS13AQ96RL7 3174 aa-0.81□□□□□ -2.54
PMS1-216ENST00000447734 TMEM167AQ8TBQ9 72 aa-0.83□□□□□ -2.54
PMS1-216ENST00000447734 CD52P31358 61 aa-0.84□□□□□ -2.54
PMS1-216ENST00000447734 WDFY3Q8IZQ1 3526 aa-0.85□□□□□ -2.55
PMS1-216ENST00000447734 UTRNP46939 3433 aa-0.87□□□□□ -2.55
PMS1-216ENST00000447734 BRCA2P51587 3418 aa-0.9□□□□□ -2.55
PMS1-216ENST00000447734 GOLGB1Q14789 3259 aaKnown RBP-0.9□□□□□ -2.55
PMS1-216ENST00000447734 XIRP2A4UGR9 3374 aa-0.93□□□□□ -2.56
PMS1-216ENST00000447734 CENPFP49454 3210 aa-0.93□□□□□ -2.56
PMS1-216ENST00000447734 ASPMQ8IZT6 3477 aa-0.96□□□□□ -2.56
PMS1-216ENST00000447734 RPL39P5Q59GN2 51 aa-0.96□□□□□ -2.56
PMS1-216ENST00000447734 DEFB108AA8MXU0 73 aa-1.02□□□□□ -2.57
PMS1-216ENST00000447734 LINC01556Q5JQF7 62 aa-1.04□□□□□ -2.58
PMS1-216ENST00000447734 KRTAP19-2Q3LHN2 52 aa-1.06□□□□□ -2.58
PMS1-216ENST00000447734 APELAP0DMC3 54 aa-1.11□□□□□ -2.59
PMS1-216ENST00000447734 A0A096LPF7 62 aa-1.14□□□□□ -2.59
PMS1-216ENST00000447734 Q9Y3F1 56 aa-1.32□□□□□ -2.62
PMS1-216ENST00000447734 HTN3P15516 51 aa-1.4□□□□□ -2.63
PMS1-216ENST00000447734 DEFB108BQ8NET1 73 aa-1.51□□□□□ -2.65
PMS1-216ENST00000447734 COX14Q96I36 57 aa-1.6□□□□□ -2.67
PMS1-216ENST00000447734 STATHP02808 62 aa-1.73□□□□□ -2.69
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms