RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SMIM31A0A1B0GVY4 71 aa0.91□□□□□ -2.26
HMGB1P48-201ENST00000446155 NMES1Q9C002 83 aa0.91□□□□□ -2.26
HMGB1P48-201ENST00000446155 MUC5ACP98088 5654 aa0.91□□□□□ -2.26
HMGB1P48-201ENST00000446155 UMAD1C9J7I0 102 aa0.9□□□□□ -2.27
HMGB1P48-201ENST00000446155 RPS29P62273 56 aaKnown RBP0.9□□□□□ -2.27
HMGB1P48-201ENST00000446155 IFI27P40305 119 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P48-201ENST00000446155 MT4P47944 62 aa0.89□□□□□ -2.27
HMGB1P48-201ENST00000446155 MT1BP07438 61 aa0.88□□□□□ -2.27
HMGB1P48-201ENST00000446155 COX7BP24311 80 aa0.88□□□□□ -2.27
HMGB1P48-201ENST00000446155 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
HMGB1P48-201ENST00000446155 H3BVH4 76 aa0.87□□□□□ -2.27
HMGB1P48-201ENST00000446155 K7EQZ3 153 aa0.87□□□□□ -2.27
HMGB1P48-201ENST00000446155 CRIP1P50238 77 aa0.87□□□□□ -2.27
HMGB1P48-201ENST00000446155 CRIPTQ9P021 101 aa0.87□□□□□ -2.27
HMGB1P48-201ENST00000446155 M0QY20 66 aa0.86□□□□□ -2.27
HMGB1P48-201ENST00000446155 C6orf48Q9UBA6 75 aa0.86□□□□□ -2.27
HMGB1P48-201ENST00000446155 NDUFA1O15239 70 aa0.85□□□□□ -2.27
HMGB1P48-201ENST00000446155 COX8AP10176 69 aa0.85□□□□□ -2.27
HMGB1P48-201ENST00000446155 PRLHP81277 87 aa0.85□□□□□ -2.27
HMGB1P48-201ENST00000446155 I3L3M4 83 aa0.84□□□□□ -2.27
HMGB1P48-201ENST00000446155 KRTAP19-8Q3LI54 63 aa0.84□□□□□ -2.27
HMGB1P48-201ENST00000446155 Q5BKY6 102 aa0.84□□□□□ -2.27
HMGB1P48-201ENST00000446155 NREPQ16612 68 aa0.83□□□□□ -2.28
HMGB1P48-201ENST00000446155 TOMM5Q8N4H5 51 aa0.81□□□□□ -2.28
HMGB1P48-201ENST00000446155 RPL39LQ96EH5 51 aaKnown RBP0.81□□□□□ -2.28
HMGB1P48-201ENST00000446155 TMEM167BQ9NRX6 74 aa0.81□□□□□ -2.28
HMGB1P48-201ENST00000446155 MRPL34Q9BQ48 92 aaKnown RBP0.8□□□□□ -2.28
HMGB1P48-201ENST00000446155 TOMM7Q9P0U1 55 aa0.8□□□□□ -2.28
HMGB1P48-201ENST00000446155 SPRR1BP22528 89 aa0.79□□□□□ -2.28
HMGB1P48-201ENST00000446155 FCER1GP30273 86 aa0.79□□□□□ -2.28
HMGB1P48-201ENST00000446155 POLR2KP53803 58 aaKnown RBP0.79□□□□□ -2.28
HMGB1P48-201ENST00000446155 SPRR2GQ9BYE4 73 aa0.79□□□□□ -2.28
HMGB1P48-201ENST00000446155 SPRR1AP35321 89 aa0.78□□□□□ -2.28
HMGB1P48-201ENST00000446155 RPL39P62891 51 aaKnown RBP0.78□□□□□ -2.28
HMGB1P48-201ENST00000446155 SERF2P84101 59 aa0.77□□□□□ -2.29
HMGB1P48-201ENST00000446155 KRTAP20-2Q3LI61 65 aa0.77□□□□□ -2.29
HMGB1P48-201ENST00000446155 ETDCA0A1B0GVM5 59 aa0.76□□□□□ -2.29
HMGB1P48-201ENST00000446155 MT1XP80297 61 aa0.76□□□□□ -2.29
HMGB1P48-201ENST00000446155 ATXN8Q156A1 80 aa0.76□□□□□ -2.29
HMGB1P48-201ENST00000446155 GNG13Q9P2W3 67 aa0.76□□□□□ -2.29
HMGB1P48-201ENST00000446155 DEFB105AQ8NG35 78 aa0.75□□□□□ -2.29
HMGB1P48-201ENST00000446155 KCNQ1DNQ9H478 68 aa0.75□□□□□ -2.29
HMGB1P48-201ENST00000446155 CDKN2A-AS1Q9UH64 79 aa0.75□□□□□ -2.29
HMGB1P48-201ENST00000446155 IGIPA6NJ69 53 aa0.73□□□□□ -2.29
HMGB1P48-201ENST00000446155 LINC00158P58513 81 aa0.73□□□□□ -2.29
HMGB1P48-201ENST00000446155 SMIM2Q9BVW6 85 aa0.72□□□□□ -2.29
HMGB1P48-201ENST00000446155 H1FX-AS1Q4G0G2 97 aa0.71□□□□□ -2.3
HMGB1P48-201ENST00000446155 S100ZQ8WXG8 99 aa0.71□□□□□ -2.3
HMGB1P48-201ENST00000446155 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
HMGB1P48-201ENST00000446155 H0YAA0 97 aa0.69□□□□□ -2.3
HMGB1P48-201ENST00000446155 MT1EP04732 61 aa0.69□□□□□ -2.3
HMGB1P48-201ENST00000446155 MT1GP13640 62 aa0.69□□□□□ -2.3
HMGB1P48-201ENST00000446155 KRTAP19-7Q3SYF9 63 aa0.69□□□□□ -2.3
HMGB1P48-201ENST00000446155 UBL5Q9BZL1 73 aa0.69□□□□□ -2.3
HMGB1P48-201ENST00000446155 SMIM27A0A1W2PRY6 76 aa0.68□□□□□ -2.3
HMGB1P48-201ENST00000446155 C3orf79P0CE67 100 aa0.68□□□□□ -2.3
HMGB1P48-201ENST00000446155 WFDC13Q8IUB5 93 aa0.68□□□□□ -2.3
HMGB1P48-201ENST00000446155 K7EMI3 77 aa0.67□□□□□ -2.3
HMGB1P48-201ENST00000446155 MT1MQ8N339 61 aa0.67□□□□□ -2.3
HMGB1P48-201ENST00000446155 IGLV5-48A0A075B6I7 105 aa0.66□□□□□ -2.3
HMGB1P48-201ENST00000446155 LINC01549A6NIU2 74 aa0.65□□□□□ -2.31
HMGB1P48-201ENST00000446155 LINC01546A6NGU7 62 aa0.64□□□□□ -2.31
HMGB1P48-201ENST00000446155 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
HMGB1P48-201ENST00000446155 LINC00308Q8TCZ7 52 aa0.63□□□□□ -2.31
HMGB1P48-201ENST00000446155 MT1LQ93083 61 aa0.62□□□□□ -2.31
HMGB1P48-201ENST00000446155 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
HMGB1P48-201ENST00000446155 S4R3F8 94 aa0.6□□□□□ -2.31
HMGB1P48-201ENST00000446155 KRTAP19-5Q3LI72 72 aa0.59□□□□□ -2.31
HMGB1P48-201ENST00000446155 PLNP26678 52 aa0.57□□□□□ -2.32
HMGB1P48-201ENST00000446155 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
HMGB1P48-201ENST00000446155 H0YGX0 51 aa0.54□□□□□ -2.32
HMGB1P48-201ENST00000446155 M0QZ58 72 aa0.54□□□□□ -2.32
HMGB1P48-201ENST00000446155 KRTAP6-1Q3LI64 71 aa0.53□□□□□ -2.32
HMGB1P48-201ENST00000446155 MMP24-AS1A0A0U1RRL7 71 aa0.52□□□□□ -2.33
HMGB1P48-201ENST00000446155 MT1AP04731 61 aa0.51□□□□□ -2.33
HMGB1P48-201ENST00000446155 PRM1P04553 51 aa0.47□□□□□ -2.33
HMGB1P48-201ENST00000446155 TNP1P09430 55 aa0.41□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms