RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 UQCR11O14957 56 aa5.25□□□□□ -1.57
LINC00642-202ENST00000442515 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
LINC00642-202ENST00000442515 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
LINC00642-202ENST00000442515 A0A1B0GU33 70 aa5.23□□□□□ -1.57
LINC00642-202ENST00000442515 MT1EP04732 61 aa5.23□□□□□ -1.57
LINC00642-202ENST00000442515 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
LINC00642-202ENST00000442515 MIR22HGQ0VDD5 57 aa5.17□□□□□ -1.58
LINC00642-202ENST00000442515 SPATA8Q6RVD6 105 aa5.17□□□□□ -1.58
LINC00642-202ENST00000442515 BRK1Q8WUW1 75 aa5.17□□□□□ -1.58
LINC00642-202ENST00000442515 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
LINC00642-202ENST00000442515 H3BS24 57 aa5.11□□□□□ -1.59
LINC00642-202ENST00000442515 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
LINC00642-202ENST00000442515 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
LINC00642-202ENST00000442515 KRTAP13-4Q3LI77 160 aa5.09□□□□□ -1.59
LINC00642-202ENST00000442515 PRO0628Q9UI54 55 aa5.09□□□□□ -1.59
LINC00642-202ENST00000442515 MT1GP13640 62 aa5.08□□□□□ -1.6
LINC00642-202ENST00000442515 A8MU10 97 aa5.06□□□□□ -1.6
LINC00642-202ENST00000442515 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
LINC00642-202ENST00000442515 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
LINC00642-202ENST00000442515 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
LINC00642-202ENST00000442515 MT1MQ8N339 61 aa5.01□□□□□ -1.61
LINC00642-202ENST00000442515 A0A0D9SG42 100 aa4.98□□□□□ -1.61
LINC00642-202ENST00000442515 K7ERS5 55 aa4.98□□□□□ -1.61
LINC00642-202ENST00000442515 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
LINC00642-202ENST00000442515 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
LINC00642-202ENST00000442515 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
LINC00642-202ENST00000442515 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
LINC00642-202ENST00000442515 PMAIP1Q13794 54 aa4.89□□□□□ -1.63
LINC00642-202ENST00000442515 CAMK2N1Q7Z7J9 78 aa4.89□□□□□ -1.63
LINC00642-202ENST00000442515 MT1LQ93083 61 aa4.89□□□□□ -1.63
LINC00642-202ENST00000442515 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
LINC00642-202ENST00000442515 SPINT4Q6UDR6 99 aa4.88□□□□□ -1.63
LINC00642-202ENST00000442515 AHNAKQ09666 5890 aaKnown RBP4.75□□□□□ -1.65
LINC00642-202ENST00000442515 ROMO1P60602 79 aa4.74□□□□□ -1.65
LINC00642-202ENST00000442515 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
LINC00642-202ENST00000442515 KTN1-AS1Q86SY8 53 aa4.72□□□□□ -1.65
LINC00642-202ENST00000442515 MUC5BQ9HC84 5762 aaPredicted RBP4.71□□□□□ -1.66
LINC00642-202ENST00000442515 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
LINC00642-202ENST00000442515 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
LINC00642-202ENST00000442515 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
LINC00642-202ENST00000442515 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
LINC00642-202ENST00000442515 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.67
LINC00642-202ENST00000442515 TNP1P09430 55 aa4.55□□□□□ -1.68
LINC00642-202ENST00000442515 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
LINC00642-202ENST00000442515 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
LINC00642-202ENST00000442515 KRTAP5-8O75690 187 aa4.49□□□□□ -1.69
LINC00642-202ENST00000442515 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
LINC00642-202ENST00000442515 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
LINC00642-202ENST00000442515 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
LINC00642-202ENST00000442515 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
LINC00642-202ENST00000442515 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
LINC00642-202ENST00000442515 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
LINC00642-202ENST00000442515 MT1AP04731 61 aa4.14□□□□□ -1.75
LINC00642-202ENST00000442515 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
LINC00642-202ENST00000442515 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
LINC00642-202ENST00000442515 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
LINC00642-202ENST00000442515 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
LINC00642-202ENST00000442515 MT3P25713 68 aa3.8□□□□□ -1.8
LINC00642-202ENST00000442515 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
LINC00642-202ENST00000442515 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
LINC00642-202ENST00000442515 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
LINC00642-202ENST00000442515 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
LINC00642-202ENST00000442515 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
LINC00642-202ENST00000442515 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
LINC00642-202ENST00000442515 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
LINC00642-202ENST00000442515 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
LINC00642-202ENST00000442515 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
LINC00642-202ENST00000442515 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
LINC00642-202ENST00000442515 INE1O15225 51 aa3.06□□□□□ -1.92
LINC00642-202ENST00000442515 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
LINC00642-202ENST00000442515 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
LINC00642-202ENST00000442515 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
LINC00642-202ENST00000442515 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
LINC00642-202ENST00000442515 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
LINC00642-202ENST00000442515 PRM1P04553 51 aa2.45□□□□□ -2.02
LINC00642-202ENST00000442515 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
LINC00642-202ENST00000442515 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 91.8 ms