RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 FBN2P35556 2912 aa0.71□□□□□ -2.3
PGBD4P3-201ENST00000440731 FAT2Q9NYQ8 4349 aa0.71□□□□□ -2.3
PGBD4P3-201ENST00000440731 VCANP13611 3396 aa0.71□□□□□ -2.3
PGBD4P3-201ENST00000440731 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
PGBD4P3-201ENST00000440731 PLECQ15149 4684 aaKnown RBP0.71□□□□□ -2.3
PGBD4P3-201ENST00000440731 PKD1P98161 4303 aa0.7□□□□□ -2.3
PGBD4P3-201ENST00000440731 TNXBP22105 4242 aa0.7□□□□□ -2.3
PGBD4P3-201ENST00000440731 FAT3Q8TDW7 4589 aa0.7□□□□□ -2.3
PGBD4P3-201ENST00000440731 HSPG2P98160 4391 aa0.7□□□□□ -2.3
PGBD4P3-201ENST00000440731 MGAM2Q2M2H8 2515 aa0.7□□□□□ -2.3
PGBD4P3-201ENST00000440731 TENM3Q9P273 2699 aa0.69□□□□□ -2.3
PGBD4P3-201ENST00000440731 RYR2Q92736 4967 aa0.69□□□□□ -2.3
PGBD4P3-201ENST00000440731 HRNRQ86YZ3 2850 aaPredicted RBP0.69□□□□□ -2.3
PGBD4P3-201ENST00000440731 ADGRG4Q8IZF6 3080 aa0.68□□□□□ -2.3
PGBD4P3-201ENST00000440731 DNAH5Q8TE73 4624 aa0.68□□□□□ -2.3
PGBD4P3-201ENST00000440731 KMT2CQ8NEZ4 4911 aaKnown RBP0.68□□□□□ -2.3
PGBD4P3-201ENST00000440731 SMR3BP02814 79 aaPredicted RBP0.68□□□□□ -2.3
PGBD4P3-201ENST00000440731 CDH23Q9H251 3354 aa0.68□□□□□ -2.3
PGBD4P3-201ENST00000440731 RYR1P21817 5038 aa0.67□□□□□ -2.3
PGBD4P3-201ENST00000440731 PKHD1P08F94 4074 aa0.67□□□□□ -2.3
PGBD4P3-201ENST00000440731 PRM1P04553 51 aa0.66□□□□□ -2.3
PGBD4P3-201ENST00000440731 LPAP08519 4548 aa0.66□□□□□ -2.3
PGBD4P3-201ENST00000440731 DYNC1H1Q14204 4646 aaKnown RBP0.66□□□□□ -2.3
PGBD4P3-201ENST00000440731 LRP1Q07954 4544 aaKnown RBP0.65□□□□□ -2.3
PGBD4P3-201ENST00000440731 EYSQ5T1H1 3165 aa0.65□□□□□ -2.31
PGBD4P3-201ENST00000440731 KMT2DO14686 5537 aa0.64□□□□□ -2.31
PGBD4P3-201ENST00000440731 KRTAP19-5Q3LI72 72 aa0.63□□□□□ -2.31
PGBD4P3-201ENST00000440731 SSPOA2VEC9 5147 aa0.61□□□□□ -2.31
PGBD4P3-201ENST00000440731 MT1AP04731 61 aa0.61□□□□□ -2.31
PGBD4P3-201ENST00000440731 STARD9Q9P2P6 4700 aa0.61□□□□□ -2.31
PGBD4P3-201ENST00000440731 MUC17Q685J3 4493 aa0.61□□□□□ -2.31
PGBD4P3-201ENST00000440731 FAT1Q14517 4588 aa0.6□□□□□ -2.31
PGBD4P3-201ENST00000440731 MDN1Q9NU22 5596 aa0.6□□□□□ -2.31
PGBD4P3-201ENST00000440731 ABCA13Q86UQ4 5058 aa0.6□□□□□ -2.31
PGBD4P3-201ENST00000440731 SPRR2GQ9BYE4 73 aa0.59□□□□□ -2.31
PGBD4P3-201ENST00000440731 EPPK1P58107 5090 aaKnown RBP0.58□□□□□ -2.32
PGBD4P3-201ENST00000440731 MUC5ACP98088 5654 aa0.58□□□□□ -2.32
PGBD4P3-201ENST00000440731 HERC1Q15751 4861 aa0.58□□□□□ -2.32
PGBD4P3-201ENST00000440731 HYDINQ4G0P3 5121 aa0.57□□□□□ -2.32
PGBD4P3-201ENST00000440731 RYR3Q15413 4870 aa0.57□□□□□ -2.32
PGBD4P3-201ENST00000440731 RNF213Q63HN8 5207 aa0.57□□□□□ -2.32
PGBD4P3-201ENST00000440731 SPRR2DP22532 72 aa0.56□□□□□ -2.32
PGBD4P3-201ENST00000440731 SPRR2BP35325 72 aa0.56□□□□□ -2.32
PGBD4P3-201ENST00000440731 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
PGBD4P3-201ENST00000440731 FAT4Q6V0I7 4981 aa0.55□□□□□ -2.32
PGBD4P3-201ENST00000440731 SPRR2AP35326 72 aa0.55□□□□□ -2.32
PGBD4P3-201ENST00000440731 KRTAP6-2Q3LI66 62 aa0.55□□□□□ -2.32
PGBD4P3-201ENST00000440731 KRTAP19-3Q7Z4W3 81 aa0.55□□□□□ -2.32
PGBD4P3-201ENST00000440731 MT1EP04732 61 aa0.54□□□□□ -2.32
PGBD4P3-201ENST00000440731 SPRR2FQ96RM1 72 aa0.54□□□□□ -2.32
PGBD4P3-201ENST00000440731 LRP1BQ9NZR2 4599 aa0.54□□□□□ -2.32
PGBD4P3-201ENST00000440731 BIRC6Q9NR09 4857 aa0.53□□□□□ -2.32
PGBD4P3-201ENST00000440731 LRP2P98164 4655 aa0.53□□□□□ -2.32
PGBD4P3-201ENST00000440731 MT1XP80297 61 aa0.52□□□□□ -2.33
PGBD4P3-201ENST00000440731 KRTAP19-8Q3LI54 63 aa0.52□□□□□ -2.33
PGBD4P3-201ENST00000440731 MT1LQ93083 61 aa0.52□□□□□ -2.33
PGBD4P3-201ENST00000440731 SPRR2EP22531 72 aa0.51□□□□□ -2.33
PGBD4P3-201ENST00000440731 KRTAP19-2Q3LHN2 52 aa0.5□□□□□ -2.33
PGBD4P3-201ENST00000440731 MT1HP80294 61 aa0.48□□□□□ -2.33
PGBD4P3-201ENST00000440731 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
PGBD4P3-201ENST00000440731 DNHD1Q96M86 4753 aa0.48□□□□□ -2.33
PGBD4P3-201ENST00000440731 KRTAP19-7Q3SYF9 63 aa0.46□□□□□ -2.34
PGBD4P3-201ENST00000440731 MT1BP07438 61 aa0.45□□□□□ -2.34
PGBD4P3-201ENST00000440731 HMCN2Q8NDA2 5059 aa0.45□□□□□ -2.34
PGBD4P3-201ENST00000440731 HERC2O95714 4834 aa0.44□□□□□ -2.34
PGBD4P3-201ENST00000440731 MT1GP13640 62 aa0.43□□□□□ -2.34
PGBD4P3-201ENST00000440731 MT1HL1P0DM35 61 aa0.41□□□□□ -2.34
PGBD4P3-201ENST00000440731 MT2AP02795 61 aa0.4□□□□□ -2.35
PGBD4P3-201ENST00000440731 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
PGBD4P3-201ENST00000440731 MT1FP04733 61 aa0.39□□□□□ -2.35
PGBD4P3-201ENST00000440731 MT1MQ8N339 61 aa0.39□□□□□ -2.35
PGBD4P3-201ENST00000440731 USH2AO75445 5202 aa0.39□□□□□ -2.35
PGBD4P3-201ENST00000440731 KRTAP6-1Q3LI64 71 aa0.38□□□□□ -2.35
PGBD4P3-201ENST00000440731 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.36
PGBD4P3-201ENST00000440731 KRTAP19-6Q3LI70 58 aa0.23□□□□□ -2.37
PGBD4P3-201ENST00000440731 MT4P47944 62 aa0.19□□□□□ -2.38
PGBD4P3-201ENST00000440731 KRTAP20-2Q3LI61 65 aa0.12□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms