RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 TMEM170BQ5T4T1 132 aa-0.13□□□□□ -2.43
VPS41-207ENST00000439468 LINC00587B1AMM8 73 aa-0.14□□□□□ -2.43
VPS41-207ENST00000439468 K7EMI3 77 aa-0.14□□□□□ -2.43
VPS41-207ENST00000439468 LINC00308Q8TCZ7 52 aa-0.14□□□□□ -2.43
VPS41-207ENST00000439468 SNHG12Q9BXW3 62 aa-0.14□□□□□ -2.43
VPS41-207ENST00000439468 MYMXA0A1B0GTQ4 84 aa-0.15□□□□□ -2.43
VPS41-207ENST00000439468 NAP1L6A6NFF2 107 aa-0.15□□□□□ -2.43
VPS41-207ENST00000439468 NDUFB1O75438 58 aa-0.15□□□□□ -2.43
VPS41-207ENST00000439468 MRPL54Q6P161 138 aaKnown RBP-0.15□□□□□ -2.43
VPS41-207ENST00000439468 CYP4F30PQ9H0H9 118 aa-0.15□□□□□ -2.43
VPS41-207ENST00000439468 FAUP35544 74 aaKnown RBP-0.16□□□□□ -2.44
VPS41-207ENST00000439468 TOMM5Q8N4H5 51 aa-0.16□□□□□ -2.44
VPS41-207ENST00000439468 SERP1Q9Y6X1 66 aa-0.16□□□□□ -2.44
VPS41-207ENST00000439468 MPC2O95563 127 aa-0.17□□□□□ -2.44
VPS41-207ENST00000439468 TRAV22A0A0B4J277 110 aa-0.18□□□□□ -2.44
VPS41-207ENST00000439468 SMIM27A0A1W2PRY6 76 aa-0.18□□□□□ -2.44
VPS41-207ENST00000439468 GNG13Q9P2W3 67 aa-0.18□□□□□ -2.44
VPS41-207ENST00000439468 V9GYH0 126 aa-0.18□□□□□ -2.44
VPS41-207ENST00000439468 COPS9Q8WXC6 57 aa-0.19□□□□□ -2.44
VPS41-207ENST00000439468 MANBALQ9NQG1 85 aa-0.19□□□□□ -2.44
VPS41-207ENST00000439468 LINC01549A6NIU2 74 aa-0.2□□□□□ -2.44
VPS41-207ENST00000439468 ACYP1P07311 99 aa-0.2□□□□□ -2.44
VPS41-207ENST00000439468 PMCHL1Q16048 86 aa-0.21□□□□□ -2.44
VPS41-207ENST00000439468 TP53AIP1Q9HCN2 124 aa-0.21□□□□□ -2.44
VPS41-207ENST00000439468 S100A8P05109 93 aa-0.22□□□□□ -2.44
VPS41-207ENST00000439468 C12orf57Q99622 126 aa-0.22□□□□□ -2.44
VPS41-207ENST00000439468 HIGD1BQ9P298 99 aa-0.22□□□□□ -2.44
VPS41-207ENST00000439468 SPCS1Q9Y6A9 102 aa-0.23□□□□□ -2.45
VPS41-207ENST00000439468 GNGT1P63211 74 aa-0.24□□□□□ -2.45
VPS41-207ENST00000439468 BVES-AS1Q5T3Y7 98 aa-0.24□□□□□ -2.45
VPS41-207ENST00000439468 UMAD1C9J7I0 102 aa-0.25□□□□□ -2.45
VPS41-207ENST00000439468 PLNP26678 52 aa-0.26□□□□□ -2.45
VPS41-207ENST00000439468 PMCHL2Q9BQD1 86 aa-0.26□□□□□ -2.45
VPS41-207ENST00000439468 S100PP25815 95 aa-0.27□□□□□ -2.45
VPS41-207ENST00000439468 ADIRFQ15847 76 aa-0.27□□□□□ -2.45
VPS41-207ENST00000439468 SMCO4Q9NRQ5 59 aa-0.27□□□□□ -2.45
VPS41-207ENST00000439468 PRM1P04553 51 aa-0.28□□□□□ -2.45
VPS41-207ENST00000439468 C18orf32Q8TCD1 76 aa-0.28□□□□□ -2.45
VPS41-207ENST00000439468 NREPQ16612 68 aa-0.29□□□□□ -2.46
VPS41-207ENST00000439468 H0YGX0 51 aa-0.3□□□□□ -2.46
VPS41-207ENST00000439468 UQCR11O14957 56 aa-0.3□□□□□ -2.46
VPS41-207ENST00000439468 S100ZQ8WXG8 99 aa-0.3□□□□□ -2.46
VPS41-207ENST00000439468 H7BZZ5 65 aa-0.31□□□□□ -2.46
VPS41-207ENST00000439468 LINC01558Q9Y6Z2 57 aa-0.31□□□□□ -2.46
VPS41-207ENST00000439468 APOC3P02656 99 aa-0.32□□□□□ -2.46
VPS41-207ENST00000439468 A0A1B0GV90 55 aa-0.33□□□□□ -2.46
VPS41-207ENST00000439468 H0Y9P7 68 aa-0.33□□□□□ -2.46
VPS41-207ENST00000439468 LEPROTL1O95214 131 aa-0.33□□□□□ -2.46
VPS41-207ENST00000439468 CHKB-CPT1BH3BT56 60 aa-0.34□□□□□ -2.46
VPS41-207ENST00000439468 KANTRA0A1W2PQU2 76 aa-0.35□□□□□ -2.47
VPS41-207ENST00000439468 ATOX1O00244 68 aa-0.36□□□□□ -2.47
VPS41-207ENST00000439468 KRTDAPP60985 99 aa-0.36□□□□□ -2.47
VPS41-207ENST00000439468 Q9H521 79 aa-0.36□□□□□ -2.47
VPS41-207ENST00000439468 SYS1-DBNDD2H3BUS1 97 aa-0.38□□□□□ -2.47
VPS41-207ENST00000439468 DLEU1O43261 78 aa-0.38□□□□□ -2.47
VPS41-207ENST00000439468 UQCR10Q9UDW1 63 aa-0.4□□□□□ -2.47
VPS41-207ENST00000439468 PRO1854Q9UHT4 67 aa-0.41□□□□□ -2.48
VPS41-207ENST00000439468 PEA15Q15121 130 aa-0.42□□□□□ -2.48
VPS41-207ENST00000439468 S100A1P23297 94 aa-0.44□□□□□ -2.48
VPS41-207ENST00000439468 ATP5EP56381 51 aaPredicted RBP-0.44□□□□□ -2.48
VPS41-207ENST00000439468 SERP2Q8N6R1 65 aa-0.44□□□□□ -2.48
VPS41-207ENST00000439468 SVBPQ8N300 66 aa-0.45□□□□□ -2.48
VPS41-207ENST00000439468 UBL5Q9BZL1 73 aa-0.45□□□□□ -2.48
VPS41-207ENST00000439468 TMEM218A2RU14 115 aa-0.46□□□□□ -2.48
VPS41-207ENST00000439468 COX6CP09669 75 aa-0.46□□□□□ -2.48
VPS41-207ENST00000439468 HSD52Q0P140 79 aa-0.47□□□□□ -2.48
VPS41-207ENST00000439468 ATXN8Q156A1 80 aa-0.47□□□□□ -2.48
VPS41-207ENST00000439468 COX8AP10176 69 aa-0.49□□□□□ -2.49
VPS41-207ENST00000439468 VAMP8Q9BV40 100 aa-0.5□□□□□ -2.49
VPS41-207ENST00000439468 A0A1B0GU69 56 aa-0.51□□□□□ -2.49
VPS41-207ENST00000439468 C14orf144Q96I85 54 aa-0.52□□□□□ -2.49
VPS41-207ENST00000439468 GTF2H5Q6ZYL4 71 aa-0.57□□□□□ -2.5
VPS41-207ENST00000439468 ATP5EP2Q5VTU8 51 aa-0.59□□□□□ -2.5
VPS41-207ENST00000439468 ETDBQ3ZM63 59 aa-0.68□□□□□ -2.52
VPS41-207ENST00000439468 LINC00643Q86TS7 51 aa-0.68□□□□□ -2.52
VPS41-207ENST00000439468 M0R143 59 aa-0.71□□□□□ -2.52
VPS41-207ENST00000439468 PYY3Q5JQD4 70 aa-0.73□□□□□ -2.53
VPS41-207ENST00000439468 COL5A1-AS1Q5SY13 56 aa-0.81□□□□□ -2.54
Retrieved 78 of 20,778 RNA–protein pairs in 126.6 ms