RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
HCG20-208ENST00000439406 PLAC4Q8WY50 150 aa3.52□□□□□ -1.85
HCG20-208ENST00000439406 INE1O15225 51 aa3.5□□□□□ -1.85
HCG20-208ENST00000439406 M0QZ58 72 aa3.49□□□□□ -1.85
HCG20-208ENST00000439406 A0A0D9SG42 100 aa3.48□□□□□ -1.85
HCG20-208ENST00000439406 KRTAP13-4Q3LI77 160 aa3.47□□□□□ -1.85
HCG20-208ENST00000439406 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
HCG20-208ENST00000439406 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
HCG20-208ENST00000439406 KRTAP12-2P59991 146 aa3.43□□□□□ -1.86
HCG20-208ENST00000439406 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
HCG20-208ENST00000439406 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
HCG20-208ENST00000439406 KRTAP2-3P0C7H8 128 aa3.39□□□□□ -1.87
HCG20-208ENST00000439406 KRTAP2-4Q9BYR9 128 aa3.39□□□□□ -1.87
HCG20-208ENST00000439406 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
HCG20-208ENST00000439406 KMT2DO14686 5537 aa3.28□□□□□ -1.88
HCG20-208ENST00000439406 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
HCG20-208ENST00000439406 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
HCG20-208ENST00000439406 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
HCG20-208ENST00000439406 KRTAP10-7P60409 375 aaPredicted RBP3.21□□□□□ -1.9
HCG20-208ENST00000439406 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
HCG20-208ENST00000439406 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
HCG20-208ENST00000439406 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
HCG20-208ENST00000439406 MT1BP07438 61 aa3.17□□□□□ -1.9
HCG20-208ENST00000439406 SPRR2EP22531 72 aa3.17□□□□□ -1.9
HCG20-208ENST00000439406 SPRR2BP35325 72 aa3.17□□□□□ -1.9
HCG20-208ENST00000439406 SPRR2AP35326 72 aa3.17□□□□□ -1.9
HCG20-208ENST00000439406 KRTAP19-8Q3LI54 63 aa3.15□□□□□ -1.91
HCG20-208ENST00000439406 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
HCG20-208ENST00000439406 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
HCG20-208ENST00000439406 TNP1P09430 55 aa3.09□□□□□ -1.91
HCG20-208ENST00000439406 SPRR2DP22532 72 aa3.08□□□□□ -1.92
HCG20-208ENST00000439406 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
HCG20-208ENST00000439406 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
HCG20-208ENST00000439406 KRTAP8-1Q8IUC2 63 aa3.03□□□□□ -1.92
HCG20-208ENST00000439406 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
HCG20-208ENST00000439406 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
HCG20-208ENST00000439406 MT1XP80297 61 aa2.89□□□□□ -1.95
HCG20-208ENST00000439406 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
HCG20-208ENST00000439406 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
HCG20-208ENST00000439406 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
HCG20-208ENST00000439406 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
HCG20-208ENST00000439406 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
HCG20-208ENST00000439406 MT4P47944 62 aa2.7□□□□□ -1.98
HCG20-208ENST00000439406 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
HCG20-208ENST00000439406 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
HCG20-208ENST00000439406 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
HCG20-208ENST00000439406 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
HCG20-208ENST00000439406 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
HCG20-208ENST00000439406 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
HCG20-208ENST00000439406 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
HCG20-208ENST00000439406 MT1GP13640 62 aa2.6□□□□□ -1.99
HCG20-208ENST00000439406 MT1EP04732 61 aa2.59□□□□□ -1.99
HCG20-208ENST00000439406 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
HCG20-208ENST00000439406 MT1MQ8N339 61 aa2.49□□□□□ -2.01
HCG20-208ENST00000439406 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
HCG20-208ENST00000439406 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
HCG20-208ENST00000439406 KRTAP19-5Q3LI72 72 aa2.43□□□□□ -2.02
HCG20-208ENST00000439406 MT1LQ93083 61 aa2.41□□□□□ -2.02
HCG20-208ENST00000439406 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
HCG20-208ENST00000439406 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
HCG20-208ENST00000439406 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
HCG20-208ENST00000439406 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
HCG20-208ENST00000439406 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
HCG20-208ENST00000439406 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
HCG20-208ENST00000439406 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
HCG20-208ENST00000439406 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
HCG20-208ENST00000439406 MT1AP04731 61 aa2.13□□□□□ -2.07
HCG20-208ENST00000439406 KRTAP6-1Q3LI64 71 aa2.05□□□□□ -2.08
HCG20-208ENST00000439406 PRM1P04553 51 aa2.03□□□□□ -2.08
HCG20-208ENST00000439406 KRTAP6-2Q3LI66 62 aa2.03□□□□□ -2.08
HCG20-208ENST00000439406 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
HCG20-208ENST00000439406 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
HCG20-208ENST00000439406 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
HCG20-208ENST00000439406 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
HCG20-208ENST00000439406 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
HCG20-208ENST00000439406 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
HCG20-208ENST00000439406 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 41 ms