RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
HERPUD2-206ENST00000438224 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
HERPUD2-206ENST00000438224 CYSTM1Q9H1C7 97 aa3.43□□□□□ -1.86
HERPUD2-206ENST00000438224 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
HERPUD2-206ENST00000438224 COA5Q86WW8 74 aa3.41□□□□□ -1.86
HERPUD2-206ENST00000438224 SPRR2EP22531 72 aa3.4□□□□□ -1.87
HERPUD2-206ENST00000438224 SPRR2BP35325 72 aa3.4□□□□□ -1.87
HERPUD2-206ENST00000438224 SPRR2AP35326 72 aa3.4□□□□□ -1.87
HERPUD2-206ENST00000438224 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
HERPUD2-206ENST00000438224 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
HERPUD2-206ENST00000438224 COX7CP15954 63 aa3.39□□□□□ -1.87
HERPUD2-206ENST00000438224 H7BZZ5 65 aa3.37□□□□□ -1.87
HERPUD2-206ENST00000438224 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
HERPUD2-206ENST00000438224 TMEM258P61165 79 aa3.32□□□□□ -1.88
HERPUD2-206ENST00000438224 SPATA8Q6RVD6 105 aa3.3□□□□□ -1.88
HERPUD2-206ENST00000438224 A0A0D9SG42 100 aa3.29□□□□□ -1.88
HERPUD2-206ENST00000438224 SPRR2DP22532 72 aa3.28□□□□□ -1.88
HERPUD2-206ENST00000438224 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
HERPUD2-206ENST00000438224 SERP1Q9Y6X1 66 aa3.26□□□□□ -1.89
HERPUD2-206ENST00000438224 CCDC179H3BU77 68 aa3.25□□□□□ -1.89
HERPUD2-206ENST00000438224 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
HERPUD2-206ENST00000438224 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
HERPUD2-206ENST00000438224 A0A1B0GU69 56 aa3.19□□□□□ -1.9
HERPUD2-206ENST00000438224 MT1EP04732 61 aa3.19□□□□□ -1.9
HERPUD2-206ENST00000438224 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
HERPUD2-206ENST00000438224 ROMO1P60602 79 aa3.17□□□□□ -1.9
HERPUD2-206ENST00000438224 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
HERPUD2-206ENST00000438224 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
HERPUD2-206ENST00000438224 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
HERPUD2-206ENST00000438224 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
HERPUD2-206ENST00000438224 ATP5EP56381 51 aaPredicted RBP3.13□□□□□ -1.91
HERPUD2-206ENST00000438224 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
HERPUD2-206ENST00000438224 LINC01558Q9Y6Z2 57 aa3.1□□□□□ -1.91
HERPUD2-206ENST00000438224 Q1T7F1 81 aa3.08□□□□□ -1.92
HERPUD2-206ENST00000438224 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
HERPUD2-206ENST00000438224 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
HERPUD2-206ENST00000438224 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
HERPUD2-206ENST00000438224 MT1GP13640 62 aa3.05□□□□□ -1.92
HERPUD2-206ENST00000438224 MT1LQ93083 61 aa3.05□□□□□ -1.92
HERPUD2-206ENST00000438224 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
HERPUD2-206ENST00000438224 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
HERPUD2-206ENST00000438224 TNP1P09430 55 aa3.03□□□□□ -1.92
HERPUD2-206ENST00000438224 MT1MQ8N339 61 aa3.03□□□□□ -1.92
HERPUD2-206ENST00000438224 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
HERPUD2-206ENST00000438224 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
HERPUD2-206ENST00000438224 UQCR11O14957 56 aa2.99□□□□□ -1.93
HERPUD2-206ENST00000438224 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
HERPUD2-206ENST00000438224 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
HERPUD2-206ENST00000438224 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
HERPUD2-206ENST00000438224 MIR22HGQ0VDD5 57 aa2.95□□□□□ -1.94
HERPUD2-206ENST00000438224 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
HERPUD2-206ENST00000438224 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
HERPUD2-206ENST00000438224 MT4P47944 62 aa2.88□□□□□ -1.95
HERPUD2-206ENST00000438224 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
HERPUD2-206ENST00000438224 CDC42SE1Q9NRR8 79 aa2.83□□□□□ -1.96
HERPUD2-206ENST00000438224 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
HERPUD2-206ENST00000438224 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
HERPUD2-206ENST00000438224 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
HERPUD2-206ENST00000438224 INE1O15225 51 aa2.75□□□□□ -1.97
HERPUD2-206ENST00000438224 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
HERPUD2-206ENST00000438224 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
HERPUD2-206ENST00000438224 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
HERPUD2-206ENST00000438224 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
HERPUD2-206ENST00000438224 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
HERPUD2-206ENST00000438224 MT1AP04731 61 aa2.59□□□□□ -1.99
HERPUD2-206ENST00000438224 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
HERPUD2-206ENST00000438224 MUC5ACP98088 5654 aa2.55□□□□□ -2
HERPUD2-206ENST00000438224 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
HERPUD2-206ENST00000438224 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
HERPUD2-206ENST00000438224 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
HERPUD2-206ENST00000438224 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
HERPUD2-206ENST00000438224 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
HERPUD2-206ENST00000438224 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
HERPUD2-206ENST00000438224 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
HERPUD2-206ENST00000438224 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
HERPUD2-206ENST00000438224 PRM1P04553 51 aa1.4□□□□□ -2.19
HERPUD2-206ENST00000438224 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
HERPUD2-206ENST00000438224 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 116.2 ms