RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 AGLP35573 1532 aa-4.25□□□□□ -3.09
LINC01239-201ENST00000433645 ABCA10Q8WWZ4 1543 aa-4.26□□□□□ -3.09
LINC01239-201ENST00000433645 MKI67P46013 3256 aaKnown RBP-4.31□□□□□ -3.1
LINC01239-201ENST00000433645 ABCA5Q8WWZ7 1642 aa-4.33□□□□□ -3.1
LINC01239-201ENST00000433645 USP34Q70CQ2 3546 aa-4.33□□□□□ -3.1
LINC01239-201ENST00000433645 CPS1P31327 1500 aa-4.34□□□□□ -3.1
LINC01239-201ENST00000433645 TFF3Q07654 80 aa-4.34□□□□□ -3.1
LINC01239-201ENST00000433645 CFAP47Q6ZTR5 3102 aa-4.35□□□□□ -3.11
LINC01239-201ENST00000433645 PLNP26678 52 aa-4.35□□□□□ -3.11
LINC01239-201ENST00000433645 A0A087WWC5 75 aa-4.38□□□□□ -3.11
LINC01239-201ENST00000433645 SMIM2Q9BVW6 85 aa-4.41□□□□□ -3.12
LINC01239-201ENST00000433645 CLTCL1P53675 1640 aa-4.43□□□□□ -3.12
LINC01239-201ENST00000433645 TRPM2O94759 1503 aa-4.44□□□□□ -3.12
LINC01239-201ENST00000433645 SCRIBQ14160 1630 aa-4.46□□□□□ -3.12
LINC01239-201ENST00000433645 NRXN3Q9Y4C0 1643 aa-4.46□□□□□ -3.12
LINC01239-201ENST00000433645 DDX60Q8IY21 1712 aaKnown RBP-4.46□□□□□ -3.12
LINC01239-201ENST00000433645 UNC80Q8N2C7 3258 aa-4.51□□□□□ -3.13
LINC01239-201ENST00000433645 IQGAP1P46940 1657 aa-4.53□□□□□ -3.13
LINC01239-201ENST00000433645 DNAH12Q6ZR08 3092 aa-4.55□□□□□ -3.14
LINC01239-201ENST00000433645 PRXQ9BXM0 1461 aa-4.6□□□□□ -3.15
LINC01239-201ENST00000433645 SMIM5Q71RC9 77 aa-4.6□□□□□ -3.15
LINC01239-201ENST00000433645 ADCY10Q96PN6 1610 aa-4.61□□□□□ -3.15
LINC01239-201ENST00000433645 NFAT5O94916 1531 aa-4.62□□□□□ -3.15
LINC01239-201ENST00000433645 XIRP2A4UGR9 3374 aa-4.65□□□□□ -3.15
LINC01239-201ENST00000433645 TTTY10Q9BZA0 68 aa-4.66□□□□□ -3.16
LINC01239-201ENST00000433645 ABCC8Q09428 1581 aa-4.68□□□□□ -3.16
LINC01239-201ENST00000433645 ASPMQ8IZT6 3477 aa-4.68□□□□□ -3.16
LINC01239-201ENST00000433645 FANCD2Q9BXW9 1451 aa-4.71□□□□□ -3.16
LINC01239-201ENST00000433645 LOC400499M0QZD8 3231 aa-4.74□□□□□ -3.17
LINC01239-201ENST00000433645 NDUFA1O15239 70 aa-4.75□□□□□ -3.17
LINC01239-201ENST00000433645 CMC2Q9NRP2 79 aa-4.76□□□□□ -3.17
LINC01239-201ENST00000433645 CENPFP49454 3210 aa-4.82□□□□□ -3.18
LINC01239-201ENST00000433645 VCANP13611 3396 aa-4.82□□□□□ -3.18
LINC01239-201ENST00000433645 LINC01590Q5TEZ4 76 aa-4.86□□□□□ -3.19
LINC01239-201ENST00000433645 RHPN1-AS1Q9BWJ2 59 aa-4.86□□□□□ -3.19
LINC01239-201ENST00000433645 KRTAP19-2Q3LHN2 52 aa-4.87□□□□□ -3.19
LINC01239-201ENST00000433645 TOMM7Q9P0U1 55 aa-4.91□□□□□ -3.2
LINC01239-201ENST00000433645 DEFB133Q30KQ1 61 aa-4.92□□□□□ -3.2
LINC01239-201ENST00000433645 BRCA2P51587 3418 aa-4.96□□□□□ -3.2
LINC01239-201ENST00000433645 CDH23Q9H251 3354 aa-4.99□□□□□ -3.21
LINC01239-201ENST00000433645 CD52P31358 61 aa-5.08□□□□□ -3.22
LINC01239-201ENST00000433645 VPS13AQ96RL7 3174 aa-5.12□□□□□ -3.23
LINC01239-201ENST00000433645 HTN1P15515 57 aa-5.14□□□□□ -3.23
LINC01239-201ENST00000433645 DUOX1Q9NRD9 1551 aa-5.16□□□□□ -3.24
LINC01239-201ENST00000433645 A0A096LNI7 61 aa-5.18□□□□□ -3.24
LINC01239-201ENST00000433645 ERICH3Q5RHP9 1530 aa-5.18□□□□□ -3.24
LINC01239-201ENST00000433645 SAMD9LQ8IVG5 1584 aa-5.22□□□□□ -3.25
LINC01239-201ENST00000433645 SMIM31A0A1B0GVY4 71 aa-5.24□□□□□ -3.25
LINC01239-201ENST00000433645 DEFB124Q8NES8 71 aa-5.29□□□□□ -3.26
LINC01239-201ENST00000433645 RPL39P62891 51 aaKnown RBP-5.38□□□□□ -3.27
LINC01239-201ENST00000433645 TOP2AP11388 1531 aaKnown RBP-5.4□□□□□ -3.27
LINC01239-201ENST00000433645 UTRNP46939 3433 aa-5.49□□□□□ -3.29
LINC01239-201ENST00000433645 SNRPGP15A8MWD9 76 aa-5.52□□□□□ -3.29
LINC01239-201ENST00000433645 MROH2BQ7Z745 1585 aa-5.55□□□□□ -3.3
LINC01239-201ENST00000433645 ATP7AQ04656 1500 aa-5.57□□□□□ -3.3
LINC01239-201ENST00000433645 RPL39LQ96EH5 51 aaKnown RBP-5.59□□□□□ -3.3
LINC01239-201ENST00000433645 IQGAP2Q13576 1575 aa-5.64□□□□□ -3.31
LINC01239-201ENST00000433645 LINC01556Q5JQF7 62 aa-5.78□□□□□ -3.33
LINC01239-201ENST00000433645 H3BUX3 64 aa-5.82□□□□□ -3.34
LINC01239-201ENST00000433645 DEFB104AQ8WTQ1 72 aa-5.86□□□□□ -3.35
LINC01239-201ENST00000433645 TOMM5Q8N4H5 51 aa-5.94□□□□□ -3.36
LINC01239-201ENST00000433645 GOLGB1Q14789 3259 aaKnown RBP-6.15□□□□□ -3.39
LINC01239-201ENST00000433645 K7EIM0 57 aa-6.2□□□□□ -3.4
LINC01239-201ENST00000433645 APELAP0DMC3 54 aa-6.42□□□□□ -3.44
LINC01239-201ENST00000433645 ARHGAP5-AS1Q96IT6 56 aa-6.46□□□□□ -3.44
LINC01239-201ENST00000433645 A0A096LPF7 62 aa-6.49□□□□□ -3.45
LINC01239-201ENST00000433645 PRCDQ00LT1 54 aa-6.56□□□□□ -3.46
LINC01239-201ENST00000433645 GCC2Q8IWJ2 1684 aa-6.65□□□□□ -3.47
LINC01239-201ENST00000433645 TMEM167AQ8TBQ9 72 aa-6.7□□□□□ -3.48
LINC01239-201ENST00000433645 HTN3P15516 51 aa-6.77□□□□□ -3.49
LINC01239-201ENST00000433645 SNRPGP62308 76 aaKnown RBP-6.9□□□□□ -3.51
LINC01239-201ENST00000433645 Q9Y3F1 56 aa-7.01□□□□□ -3.53
LINC01239-201ENST00000433645 RPL39P5Q59GN2 51 aa-7.18□□□□□ -3.56
LINC01239-201ENST00000433645 DEFB108AA8MXU0 73 aa-7.34□□□□□ -3.58
LINC01239-201ENST00000433645 H3BSH0 61 aa-7.37□□□□□ -3.59
LINC01239-201ENST00000433645 COX14Q96I36 57 aa-7.49□□□□□ -3.61
LINC01239-201ENST00000433645 DEFB108BQ8NET1 73 aa-7.91□□□□□ -3.68
LINC01239-201ENST00000433645 STATHP02808 62 aa-8.59□□□□□ -3.78
Retrieved 78 of 20,778 RNA–protein pairs in 66.1 ms