RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
APOBEC3C-202ENST00000428892 R4GN34 69 aa4.7□□□□□ -1.66
APOBEC3C-202ENST00000428892 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
APOBEC3C-202ENST00000428892 A0A0D9SG42 100 aa4.66□□□□□ -1.66
APOBEC3C-202ENST00000428892 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
APOBEC3C-202ENST00000428892 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
APOBEC3C-202ENST00000428892 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
APOBEC3C-202ENST00000428892 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
APOBEC3C-202ENST00000428892 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
APOBEC3C-202ENST00000428892 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
APOBEC3C-202ENST00000428892 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
APOBEC3C-202ENST00000428892 SPRR2DP22532 72 aa4.56□□□□□ -1.68
APOBEC3C-202ENST00000428892 MT1XP80297 61 aa4.54□□□□□ -1.68
APOBEC3C-202ENST00000428892 KRTAP12-1P59990 96 aa4.52□□□□□ -1.69
APOBEC3C-202ENST00000428892 PLAC4Q8WY50 150 aa4.51□□□□□ -1.69
APOBEC3C-202ENST00000428892 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
APOBEC3C-202ENST00000428892 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
APOBEC3C-202ENST00000428892 ROMO1P60602 79 aa4.44□□□□□ -1.7
APOBEC3C-202ENST00000428892 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
APOBEC3C-202ENST00000428892 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.71
APOBEC3C-202ENST00000428892 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
APOBEC3C-202ENST00000428892 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
APOBEC3C-202ENST00000428892 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
APOBEC3C-202ENST00000428892 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
APOBEC3C-202ENST00000428892 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
APOBEC3C-202ENST00000428892 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
APOBEC3C-202ENST00000428892 TNP1P09430 55 aa4.22□□□□□ -1.73
APOBEC3C-202ENST00000428892 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
APOBEC3C-202ENST00000428892 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
APOBEC3C-202ENST00000428892 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
APOBEC3C-202ENST00000428892 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
APOBEC3C-202ENST00000428892 MT1EP04732 61 aa4.01□□□□□ -1.77
APOBEC3C-202ENST00000428892 MT4P47944 62 aa4.01□□□□□ -1.77
APOBEC3C-202ENST00000428892 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
APOBEC3C-202ENST00000428892 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
APOBEC3C-202ENST00000428892 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
APOBEC3C-202ENST00000428892 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
APOBEC3C-202ENST00000428892 MT1GP13640 62 aa3.9□□□□□ -1.79
APOBEC3C-202ENST00000428892 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
APOBEC3C-202ENST00000428892 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
APOBEC3C-202ENST00000428892 MT1LQ93083 61 aa3.84□□□□□ -1.79
APOBEC3C-202ENST00000428892 MT1MQ8N339 61 aa3.83□□□□□ -1.8
APOBEC3C-202ENST00000428892 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
APOBEC3C-202ENST00000428892 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
APOBEC3C-202ENST00000428892 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
APOBEC3C-202ENST00000428892 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
APOBEC3C-202ENST00000428892 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
APOBEC3C-202ENST00000428892 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
APOBEC3C-202ENST00000428892 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
APOBEC3C-202ENST00000428892 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
APOBEC3C-202ENST00000428892 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
APOBEC3C-202ENST00000428892 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
APOBEC3C-202ENST00000428892 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
APOBEC3C-202ENST00000428892 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
APOBEC3C-202ENST00000428892 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
APOBEC3C-202ENST00000428892 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
APOBEC3C-202ENST00000428892 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
APOBEC3C-202ENST00000428892 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
APOBEC3C-202ENST00000428892 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
APOBEC3C-202ENST00000428892 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
APOBEC3C-202ENST00000428892 MT1AP04731 61 aa3.27□□□□□ -1.89
APOBEC3C-202ENST00000428892 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
APOBEC3C-202ENST00000428892 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
APOBEC3C-202ENST00000428892 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
APOBEC3C-202ENST00000428892 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
APOBEC3C-202ENST00000428892 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
APOBEC3C-202ENST00000428892 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
APOBEC3C-202ENST00000428892 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
APOBEC3C-202ENST00000428892 INE1O15225 51 aa2.93□□□□□ -1.94
APOBEC3C-202ENST00000428892 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
APOBEC3C-202ENST00000428892 LCE1CQ5T751 118 aa2.56□□□□□ -2
APOBEC3C-202ENST00000428892 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
APOBEC3C-202ENST00000428892 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
APOBEC3C-202ENST00000428892 PRM1P04553 51 aa2.3□□□□□ -2.04
APOBEC3C-202ENST00000428892 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
APOBEC3C-202ENST00000428892 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
APOBEC3C-202ENST00000428892 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
APOBEC3C-202ENST00000428892 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 155.4 ms