RNA–Protein interactions for RNA: ENST00000428546.2

KCNMA1-213, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-213ENST00000428546 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
KCNMA1-213ENST00000428546 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
KCNMA1-213ENST00000428546 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
KCNMA1-213ENST00000428546 SPRR2DP22532 72 aa4.49□□□□□ -1.69
KCNMA1-213ENST00000428546 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
KCNMA1-213ENST00000428546 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
KCNMA1-213ENST00000428546 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
KCNMA1-213ENST00000428546 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
KCNMA1-213ENST00000428546 H3BS24 57 aa4.42□□□□□ -1.7
KCNMA1-213ENST00000428546 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
KCNMA1-213ENST00000428546 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
KCNMA1-213ENST00000428546 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
KCNMA1-213ENST00000428546 MT1EP04732 61 aa4.27□□□□□ -1.73
KCNMA1-213ENST00000428546 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
KCNMA1-213ENST00000428546 TNP1P09430 55 aa4.26□□□□□ -1.73
KCNMA1-213ENST00000428546 SVIPQ8NHG7 77 aa4.26□□□□□ -1.73
KCNMA1-213ENST00000428546 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
KCNMA1-213ENST00000428546 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
KCNMA1-213ENST00000428546 ROMO1P60602 79 aa4.24□□□□□ -1.73
KCNMA1-213ENST00000428546 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
KCNMA1-213ENST00000428546 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
KCNMA1-213ENST00000428546 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
KCNMA1-213ENST00000428546 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
KCNMA1-213ENST00000428546 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
KCNMA1-213ENST00000428546 PP632Q6XCG6 107 aa4.15□□□□□ -1.75
KCNMA1-213ENST00000428546 MT1GP13640 62 aa4.13□□□□□ -1.75
KCNMA1-213ENST00000428546 MT1LQ93083 61 aa4.09□□□□□ -1.75
KCNMA1-213ENST00000428546 MT1MQ8N339 61 aa4.08□□□□□ -1.76
KCNMA1-213ENST00000428546 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
KCNMA1-213ENST00000428546 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
KCNMA1-213ENST00000428546 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
KCNMA1-213ENST00000428546 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
KCNMA1-213ENST00000428546 MT4P47944 62 aa3.94□□□□□ -1.78
KCNMA1-213ENST00000428546 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
KCNMA1-213ENST00000428546 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
KCNMA1-213ENST00000428546 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
KCNMA1-213ENST00000428546 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
KCNMA1-213ENST00000428546 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
KCNMA1-213ENST00000428546 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
KCNMA1-213ENST00000428546 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
KCNMA1-213ENST00000428546 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
KCNMA1-213ENST00000428546 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
KCNMA1-213ENST00000428546 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
KCNMA1-213ENST00000428546 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
KCNMA1-213ENST00000428546 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
KCNMA1-213ENST00000428546 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
KCNMA1-213ENST00000428546 MT1AP04731 61 aa3.49□□□□□ -1.85
KCNMA1-213ENST00000428546 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
KCNMA1-213ENST00000428546 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
KCNMA1-213ENST00000428546 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
KCNMA1-213ENST00000428546 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
KCNMA1-213ENST00000428546 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
KCNMA1-213ENST00000428546 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
KCNMA1-213ENST00000428546 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
KCNMA1-213ENST00000428546 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
KCNMA1-213ENST00000428546 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
KCNMA1-213ENST00000428546 MT3P25713 68 aa3.2□□□□□ -1.9
KCNMA1-213ENST00000428546 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
KCNMA1-213ENST00000428546 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
KCNMA1-213ENST00000428546 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
KCNMA1-213ENST00000428546 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
KCNMA1-213ENST00000428546 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
KCNMA1-213ENST00000428546 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
KCNMA1-213ENST00000428546 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
KCNMA1-213ENST00000428546 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
KCNMA1-213ENST00000428546 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
KCNMA1-213ENST00000428546 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
KCNMA1-213ENST00000428546 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
KCNMA1-213ENST00000428546 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
KCNMA1-213ENST00000428546 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
KCNMA1-213ENST00000428546 INE1O15225 51 aa2.56□□□□□ -2
KCNMA1-213ENST00000428546 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
KCNMA1-213ENST00000428546 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
KCNMA1-213ENST00000428546 PRM1P04553 51 aa2.19□□□□□ -2.06
KCNMA1-213ENST00000428546 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
KCNMA1-213ENST00000428546 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
KCNMA1-213ENST00000428546 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
KCNMA1-213ENST00000428546 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 73.8 ms