RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 SPINK6Q6UWN8 80 aa1.32□□□□□ -2.2
RGPD1-203ENST00000428128 SMR3BP02814 79 aaPredicted RBP1.31□□□□□ -2.2
RGPD1-203ENST00000428128 MRPL34Q9BQ48 92 aaKnown RBP1.31□□□□□ -2.2
RGPD1-203ENST00000428128 H0YAA0 97 aa1.31□□□□□ -2.2
RGPD1-203ENST00000428128 SPART-AS1P0CW21 52 aa1.31□□□□□ -2.2
RGPD1-203ENST00000428128 DEFB4AO15263 64 aa1.31□□□□□ -2.2
RGPD1-203ENST00000428128 LCE3CQ5T5A8 94 aa1.31□□□□□ -2.2
RGPD1-203ENST00000428128 COX6B2Q6YFQ2 88 aa1.31□□□□□ -2.2
RGPD1-203ENST00000428128 DEFB130BP0DP73 79 aa1.3□□□□□ -2.2
RGPD1-203ENST00000428128 DEFB130AP0DP74 79 aa1.3□□□□□ -2.2
RGPD1-203ENST00000428128 WFDC13Q8IUB5 93 aa1.3□□□□□ -2.2
RGPD1-203ENST00000428128 KRTAP10-10P60014 251 aa1.3□□□□□ -2.2
RGPD1-203ENST00000428128 A0A096LNI7 61 aa1.28□□□□□ -2.2
RGPD1-203ENST00000428128 DEFB105AQ8NG35 78 aa1.28□□□□□ -2.2
RGPD1-203ENST00000428128 KRTAP10-5P60370 271 aa1.27□□□□□ -2.21
RGPD1-203ENST00000428128 HTN3P15516 51 aa1.27□□□□□ -2.21
RGPD1-203ENST00000428128 MT1HP80294 61 aa1.26□□□□□ -2.21
RGPD1-203ENST00000428128 PRLHP81277 87 aa1.26□□□□□ -2.21
RGPD1-203ENST00000428128 KRTAP12-4P60329 112 aa1.25□□□□□ -2.21
RGPD1-203ENST00000428128 C10orf95Q9H7T3 257 aa1.25□□□□□ -2.21
RGPD1-203ENST00000428128 SSBP3-AS1Q7Z2R9 100 aa1.24□□□□□ -2.21
RGPD1-203ENST00000428128 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
RGPD1-203ENST00000428128 KRTAP9-6A8MVA2 160 aa1.23□□□□□ -2.21
RGPD1-203ENST00000428128 H1FX-AS1Q4G0G2 97 aa1.23□□□□□ -2.21
RGPD1-203ENST00000428128 KRTAP4-3Q9BYR4 195 aa1.23□□□□□ -2.21
RGPD1-203ENST00000428128 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
RGPD1-203ENST00000428128 LCE3EQ5T5B0 92 aa1.21□□□□□ -2.22
RGPD1-203ENST00000428128 KRTAP5-5Q701N2 237 aaPredicted RBP1.21□□□□□ -2.22
RGPD1-203ENST00000428128 KRTAP12-1P59990 96 aa1.19□□□□□ -2.22
RGPD1-203ENST00000428128 MDN1Q9NU22 5596 aa1.19□□□□□ -2.22
RGPD1-203ENST00000428128 MUC12Q9UKN1 5478 aa1.18□□□□□ -2.22
RGPD1-203ENST00000428128 KRTAP5-8O75690 187 aa1.18□□□□□ -2.22
RGPD1-203ENST00000428128 KRTAP19-8Q3LI54 63 aa1.18□□□□□ -2.22
RGPD1-203ENST00000428128 CRIPTQ9P021 101 aa1.18□□□□□ -2.22
RGPD1-203ENST00000428128 SPINK1P00995 79 aa1.14□□□□□ -2.23
RGPD1-203ENST00000428128 S4R3F8 94 aa1.13□□□□□ -2.23
RGPD1-203ENST00000428128 SPRR2EP22531 72 aa1.12□□□□□ -2.23
RGPD1-203ENST00000428128 SPRR2BP35325 72 aa1.12□□□□□ -2.23
RGPD1-203ENST00000428128 SPRR2AP35326 72 aa1.12□□□□□ -2.23
RGPD1-203ENST00000428128 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
RGPD1-203ENST00000428128 SPRR2DP22532 72 aa1.11□□□□□ -2.23
RGPD1-203ENST00000428128 LCE3DQ9BYE3 92 aa1.1□□□□□ -2.23
RGPD1-203ENST00000428128 M0QZ58 72 aa1.09□□□□□ -2.23
RGPD1-203ENST00000428128 A0A0D9SG42 100 aa1.09□□□□□ -2.24
RGPD1-203ENST00000428128 M0R2T5 61 aa1.09□□□□□ -2.24
RGPD1-203ENST00000428128 MT2AP02795 61 aa1.09□□□□□ -2.24
RGPD1-203ENST00000428128 SPRR2GQ9BYE4 73 aa1.08□□□□□ -2.24
RGPD1-203ENST00000428128 KRTAP12-3P60328 96 aa1.03□□□□□ -2.24
RGPD1-203ENST00000428128 MT1FP04733 61 aa1.02□□□□□ -2.25
RGPD1-203ENST00000428128 MT1BP07438 61 aa1□□□□□ -2.25
RGPD1-203ENST00000428128 SPRR2FQ96RM1 72 aa1□□□□□ -2.25
RGPD1-203ENST00000428128 LCE1CQ5T751 118 aa0.98□□□□□ -2.25
RGPD1-203ENST00000428128 LCE1BQ5T7P3 118 aa0.98□□□□□ -2.25
RGPD1-203ENST00000428128 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
RGPD1-203ENST00000428128 KRTAP8-1Q8IUC2 63 aa0.97□□□□□ -2.25
RGPD1-203ENST00000428128 TNP1P09430 55 aa0.91□□□□□ -2.26
RGPD1-203ENST00000428128 MT4P47944 62 aa0.91□□□□□ -2.26
RGPD1-203ENST00000428128 LCE3AQ5TA76 89 aa0.88□□□□□ -2.27
RGPD1-203ENST00000428128 MT1XP80297 61 aa0.87□□□□□ -2.27
RGPD1-203ENST00000428128 KRTAP19-5Q3LI72 72 aa0.87□□□□□ -2.27
RGPD1-203ENST00000428128 KRTAP20-2Q3LI61 65 aa0.87□□□□□ -2.27
RGPD1-203ENST00000428128 MT1MQ8N339 61 aa0.84□□□□□ -2.27
RGPD1-203ENST00000428128 MT1GP13640 62 aa0.83□□□□□ -2.28
RGPD1-203ENST00000428128 MT1EP04732 61 aa0.83□□□□□ -2.28
RGPD1-203ENST00000428128 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
RGPD1-203ENST00000428128 KRTAP19-7Q3SYF9 63 aa0.8□□□□□ -2.28
RGPD1-203ENST00000428128 OBSCNQ5VST9 7968 aa0.77□□□□□ -2.29
RGPD1-203ENST00000428128 MT1AP04731 61 aa0.77□□□□□ -2.29
RGPD1-203ENST00000428128 MT1LQ93083 61 aa0.75□□□□□ -2.29
RGPD1-203ENST00000428128 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
RGPD1-203ENST00000428128 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
RGPD1-203ENST00000428128 PRM1P04553 51 aa0.69□□□□□ -2.3
RGPD1-203ENST00000428128 MUC19Q7Z5P9 8384 aa0.68□□□□□ -2.3
RGPD1-203ENST00000428128 KRTAP21-2Q3LI59 83 aa0.68□□□□□ -2.3
RGPD1-203ENST00000428128 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
RGPD1-203ENST00000428128 KRTAP6-1Q3LI64 71 aa0.62□□□□□ -2.31
RGPD1-203ENST00000428128 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
RGPD1-203ENST00000428128 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 41.2 ms