RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 H7BZZ5 65 aa2.44□□□□□ -2.02
SDCBP-203ENST00000424270 KRTAP10-12P60413 245 aa2.44□□□□□ -2.02
SDCBP-203ENST00000424270 CASC2Q6XLA1 102 aa2.44□□□□□ -2.02
SDCBP-203ENST00000424270 ROMO1P60602 79 aa2.43□□□□□ -2.02
SDCBP-203ENST00000424270 TP53AIP1Q9HCN2 124 aa2.43□□□□□ -2.02
SDCBP-203ENST00000424270 SNURFQ9Y675 71 aa2.43□□□□□ -2.02
SDCBP-203ENST00000424270 MMP24-AS1A0A0U1RRL7 71 aa2.42□□□□□ -2.02
SDCBP-203ENST00000424270 A0A1B0GU33 70 aa2.42□□□□□ -2.02
SDCBP-203ENST00000424270 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
SDCBP-203ENST00000424270 R4GN34 69 aa2.4□□□□□ -2.03
SDCBP-203ENST00000424270 H0Y9P7 68 aa2.39□□□□□ -2.03
SDCBP-203ENST00000424270 LINC00208Q96KT6 92 aa2.39□□□□□ -2.03
SDCBP-203ENST00000424270 TRAV22A0A0B4J277 110 aa2.38□□□□□ -2.03
SDCBP-203ENST00000424270 CYP4F30PQ9H0H9 118 aa2.38□□□□□ -2.03
SDCBP-203ENST00000424270 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
SDCBP-203ENST00000424270 Q1T7F1 81 aa2.36□□□□□ -2.03
SDCBP-203ENST00000424270 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
SDCBP-203ENST00000424270 LOC101927531A0A1B0GV80 90 aa2.35□□□□□ -2.03
SDCBP-203ENST00000424270 M0QZ58 72 aa2.35□□□□□ -2.03
SDCBP-203ENST00000424270 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
SDCBP-203ENST00000424270 SPINT4Q6UDR6 99 aa2.35□□□□□ -2.03
SDCBP-203ENST00000424270 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
SDCBP-203ENST00000424270 MT1EP04732 61 aa2.33□□□□□ -2.04
SDCBP-203ENST00000424270 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
SDCBP-203ENST00000424270 MT1GP13640 62 aa2.31□□□□□ -2.04
SDCBP-203ENST00000424270 MIR22HGQ0VDD5 57 aa2.31□□□□□ -2.04
SDCBP-203ENST00000424270 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
SDCBP-203ENST00000424270 KRTAP19-7Q3SYF9 63 aa2.3□□□□□ -2.04
SDCBP-203ENST00000424270 SPTSSBQ8NFR3 76 aa2.3□□□□□ -2.04
SDCBP-203ENST00000424270 ACYP2P14621 99 aa2.29□□□□□ -2.04
SDCBP-203ENST00000424270 COA5Q86WW8 74 aa2.28□□□□□ -2.04
SDCBP-203ENST00000424270 CDC42SE1Q9NRR8 79 aa2.28□□□□□ -2.04
SDCBP-203ENST00000424270 P0C880 135 aa2.26□□□□□ -2.05
SDCBP-203ENST00000424270 MT1MQ8N339 61 aa2.26□□□□□ -2.05
SDCBP-203ENST00000424270 DMAC1Q96GE9 116 aa2.26□□□□□ -2.05
SDCBP-203ENST00000424270 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
SDCBP-203ENST00000424270 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
SDCBP-203ENST00000424270 LINC01558Q9Y6Z2 57 aa2.24□□□□□ -2.05
SDCBP-203ENST00000424270 CHKB-CPT1BH3BT56 60 aa2.23□□□□□ -2.05
SDCBP-203ENST00000424270 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
SDCBP-203ENST00000424270 PRR15LQ9BU68 103 aa2.2□□□□□ -2.06
SDCBP-203ENST00000424270 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SDCBP-203ENST00000424270 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
SDCBP-203ENST00000424270 A0A1B0GU69 56 aa2.17□□□□□ -2.06
SDCBP-203ENST00000424270 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
SDCBP-203ENST00000424270 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
SDCBP-203ENST00000424270 MT1LQ93083 61 aa2.15□□□□□ -2.07
SDCBP-203ENST00000424270 A0A0D9SG42 100 aa2.13□□□□□ -2.07
SDCBP-203ENST00000424270 UQCR11O14957 56 aa2.13□□□□□ -2.07
SDCBP-203ENST00000424270 SPATA8Q6RVD6 105 aa2.12□□□□□ -2.07
SDCBP-203ENST00000424270 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
SDCBP-203ENST00000424270 A8MU10 97 aa2.09□□□□□ -2.07
SDCBP-203ENST00000424270 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
SDCBP-203ENST00000424270 INE1O15225 51 aa2.04□□□□□ -2.08
SDCBP-203ENST00000424270 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
SDCBP-203ENST00000424270 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
SDCBP-203ENST00000424270 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
SDCBP-203ENST00000424270 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
SDCBP-203ENST00000424270 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
SDCBP-203ENST00000424270 KRTAP13-4Q3LI77 160 aa1.96□□□□□ -2.1
SDCBP-203ENST00000424270 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
SDCBP-203ENST00000424270 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
SDCBP-203ENST00000424270 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
SDCBP-203ENST00000424270 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
SDCBP-203ENST00000424270 KRTAP6-1Q3LI64 71 aa1.85□□□□□ -2.11
SDCBP-203ENST00000424270 LCE3EQ5T5B0 92 aa1.85□□□□□ -2.11
SDCBP-203ENST00000424270 TNP1P09430 55 aa1.84□□□□□ -2.11
SDCBP-203ENST00000424270 MT1AP04731 61 aa1.83□□□□□ -2.12
SDCBP-203ENST00000424270 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
SDCBP-203ENST00000424270 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
SDCBP-203ENST00000424270 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
SDCBP-203ENST00000424270 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
SDCBP-203ENST00000424270 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
SDCBP-203ENST00000424270 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
SDCBP-203ENST00000424270 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
SDCBP-203ENST00000424270 PRM1P04553 51 aa0.99□□□□□ -2.25
SDCBP-203ENST00000424270 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 67.5 ms