RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 NBEAL1Q6ZS30 2694 aa0.81□□□□□ -2.28
PMS1-209ENST00000424059 TENM3Q9P273 2699 aa0.81□□□□□ -2.28
PMS1-209ENST00000424059 NSD1Q96L73 2696 aaPredicted RBP0.81□□□□□ -2.28
PMS1-209ENST00000424059 SPTAN1Q13813 2472 aaKnown RBP0.8□□□□□ -2.28
PMS1-209ENST00000424059 PKHD1P08F94 4074 aa0.8□□□□□ -2.28
PMS1-209ENST00000424059 DYNC1H1Q14204 4646 aaKnown RBP0.8□□□□□ -2.28
PMS1-209ENST00000424059 KRTAP21-3Q3LHN1 58 aa0.8□□□□□ -2.28
PMS1-209ENST00000424059 STAB2Q8WWQ8 2551 aa0.8□□□□□ -2.28
PMS1-209ENST00000424059 FAT1Q14517 4588 aa0.79□□□□□ -2.28
PMS1-209ENST00000424059 TLN1Q9Y490 2541 aaKnown RBP0.79□□□□□ -2.28
PMS1-209ENST00000424059 KRTAP19-5Q3LI72 72 aa0.79□□□□□ -2.28
PMS1-209ENST00000424059 LPAP08519 4548 aa0.79□□□□□ -2.28
PMS1-209ENST00000424059 EYSQ5T1H1 3165 aa0.78□□□□□ -2.28
PMS1-209ENST00000424059 ANKRD11Q6UB99 2663 aaPredicted RBP0.78□□□□□ -2.28
PMS1-209ENST00000424059 MTORP42345 2549 aa0.78□□□□□ -2.28
PMS1-209ENST00000424059 FLNAP21333 2647 aaKnown RBP0.77□□□□□ -2.29
PMS1-209ENST00000424059 CDH23Q9H251 3354 aa0.77□□□□□ -2.29
PMS1-209ENST00000424059 ACACBO00763 2458 aa0.77□□□□□ -2.29
PMS1-209ENST00000424059 MUC17Q685J3 4493 aa0.76□□□□□ -2.29
PMS1-209ENST00000424059 KMT2CQ8NEZ4 4911 aaKnown RBP0.76□□□□□ -2.29
PMS1-209ENST00000424059 MYO9AB2RTY4 2548 aa0.76□□□□□ -2.29
PMS1-209ENST00000424059 TLN2Q9Y4G6 2542 aa0.75□□□□□ -2.29
PMS1-209ENST00000424059 ZFYVE26Q68DK2 2539 aa0.74□□□□□ -2.29
PMS1-209ENST00000424059 SYNE1Q8NF91 8797 aaKnown RBP0.74□□□□□ -2.29
PMS1-209ENST00000424059 MT1AP04731 61 aa0.72□□□□□ -2.29
PMS1-209ENST00000424059 MYO18BQ8IUG5 2567 aa0.72□□□□□ -2.29
PMS1-209ENST00000424059 STARD9Q9P2P6 4700 aa0.71□□□□□ -2.3
PMS1-209ENST00000424059 CEP295Q9C0D2 2601 aa0.71□□□□□ -2.3
PMS1-209ENST00000424059 HERC1Q15751 4861 aa0.71□□□□□ -2.3
PMS1-209ENST00000424059 KRTAP6-2Q3LI66 62 aa0.69□□□□□ -2.3
PMS1-209ENST00000424059 KRTAP19-3Q7Z4W3 81 aa0.69□□□□□ -2.3
PMS1-209ENST00000424059 FLNBO75369 2602 aaKnown RBP0.69□□□□□ -2.3
PMS1-209ENST00000424059 RYR1P21817 5038 aa0.68□□□□□ -2.3
PMS1-209ENST00000424059 FASNP49327 2511 aaKnown RBP0.68□□□□□ -2.3
PMS1-209ENST00000424059 MAST4O15021 2626 aa0.68□□□□□ -2.3
PMS1-209ENST00000424059 MGAM2Q2M2H8 2515 aa0.68□□□□□ -2.3
PMS1-209ENST00000424059 IGSF10Q6WRI0 2623 aa0.66□□□□□ -2.3
PMS1-209ENST00000424059 SPRR2GQ9BYE4 73 aa0.66□□□□□ -2.3
PMS1-209ENST00000424059 LRP1BQ9NZR2 4599 aa0.65□□□□□ -2.3
PMS1-209ENST00000424059 TENM1Q9UKZ4 2725 aa0.65□□□□□ -2.3
PMS1-209ENST00000424059 SPRR2DP22532 72 aa0.65□□□□□ -2.31
PMS1-209ENST00000424059 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
PMS1-209ENST00000424059 EPPK1P58107 5090 aaKnown RBP0.65□□□□□ -2.31
PMS1-209ENST00000424059 LRP2P98164 4655 aa0.65□□□□□ -2.31
PMS1-209ENST00000424059 MT1EP04732 61 aa0.64□□□□□ -2.31
PMS1-209ENST00000424059 SPRR2BP35325 72 aa0.64□□□□□ -2.31
PMS1-209ENST00000424059 SPRR2FQ96RM1 72 aa0.63□□□□□ -2.31
PMS1-209ENST00000424059 RYR3Q15413 4870 aa0.63□□□□□ -2.31
PMS1-209ENST00000424059 SPRR2AP35326 72 aa0.62□□□□□ -2.31
PMS1-209ENST00000424059 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
PMS1-209ENST00000424059 FAT4Q6V0I7 4981 aa0.62□□□□□ -2.31
PMS1-209ENST00000424059 MT1XP80297 61 aa0.62□□□□□ -2.31
PMS1-209ENST00000424059 KRTAP19-2Q3LHN2 52 aa0.62□□□□□ -2.31
PMS1-209ENST00000424059 MT1LQ93083 61 aa0.6□□□□□ -2.31
PMS1-209ENST00000424059 ABCA13Q86UQ4 5058 aa0.6□□□□□ -2.31
PMS1-209ENST00000424059 KRTAP19-8Q3LI54 63 aa0.59□□□□□ -2.31
PMS1-209ENST00000424059 SPRR2EP22531 72 aa0.59□□□□□ -2.32
PMS1-209ENST00000424059 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
PMS1-209ENST00000424059 MT1HP80294 61 aa0.55□□□□□ -2.32
PMS1-209ENST00000424059 KRTAP19-7Q3SYF9 63 aa0.55□□□□□ -2.32
PMS1-209ENST00000424059 HYDINQ4G0P3 5121 aa0.54□□□□□ -2.32
PMS1-209ENST00000424059 MT1BP07438 61 aa0.54□□□□□ -2.32
PMS1-209ENST00000424059 HMCN2Q8NDA2 5059 aa0.53□□□□□ -2.32
PMS1-209ENST00000424059 MT1GP13640 62 aa0.52□□□□□ -2.33
PMS1-209ENST00000424059 RNF213Q63HN8 5207 aa0.51□□□□□ -2.33
PMS1-209ENST00000424059 DNHD1Q96M86 4753 aa0.5□□□□□ -2.33
PMS1-209ENST00000424059 USH2AO75445 5202 aa0.48□□□□□ -2.33
PMS1-209ENST00000424059 HERC2O95714 4834 aa0.47□□□□□ -2.33
PMS1-209ENST00000424059 KRTAP6-1Q3LI64 71 aa0.47□□□□□ -2.33
PMS1-209ENST00000424059 BIRC6Q9NR09 4857 aa0.46□□□□□ -2.34
PMS1-209ENST00000424059 MT1HL1P0DM35 61 aa0.44□□□□□ -2.34
PMS1-209ENST00000424059 MT1MQ8N339 61 aa0.44□□□□□ -2.34
PMS1-209ENST00000424059 MT2AP02795 61 aa0.43□□□□□ -2.34
PMS1-209ENST00000424059 MT1FP04733 61 aa0.43□□□□□ -2.34
PMS1-209ENST00000424059 MUC12Q9UKN1 5478 aa0.35□□□□□ -2.35
PMS1-209ENST00000424059 MT4P47944 62 aa0.14□□□□□ -2.39
PMS1-209ENST00000424059 KRTAP19-6Q3LI70 58 aa0.14□□□□□ -2.39
PMS1-209ENST00000424059 KRTAP20-2Q3LI61 65 aa0.13□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 137.9 ms