RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SPRR2AP35326 72 aa4.5□□□□□ -1.69
SSBP3-206ENST00000420121 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
SSBP3-206ENST00000420121 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
SSBP3-206ENST00000420121 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
SSBP3-206ENST00000420121 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
SSBP3-206ENST00000420121 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
SSBP3-206ENST00000420121 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
SSBP3-206ENST00000420121 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
SSBP3-206ENST00000420121 ACYP2P14621 99 aa4.42□□□□□ -1.7
SSBP3-206ENST00000420121 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
SSBP3-206ENST00000420121 COA5Q86WW8 74 aa4.42□□□□□ -1.7
SSBP3-206ENST00000420121 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
SSBP3-206ENST00000420121 UQCR11O14957 56 aa4.35□□□□□ -1.71
SSBP3-206ENST00000420121 SPRR2DP22532 72 aa4.35□□□□□ -1.71
SSBP3-206ENST00000420121 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
SSBP3-206ENST00000420121 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.71
SSBP3-206ENST00000420121 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
SSBP3-206ENST00000420121 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
SSBP3-206ENST00000420121 A0A1B0GU69 56 aa4.19□□□□□ -1.74
SSBP3-206ENST00000420121 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
SSBP3-206ENST00000420121 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
SSBP3-206ENST00000420121 MT1EP04732 61 aa4.13□□□□□ -1.75
SSBP3-206ENST00000420121 MT3P25713 68 aa4.11□□□□□ -1.75
SSBP3-206ENST00000420121 A0A0D9SG42 100 aa4.1□□□□□ -1.75
SSBP3-206ENST00000420121 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
SSBP3-206ENST00000420121 A0A1B0GU33 70 aa4.09□□□□□ -1.75
SSBP3-206ENST00000420121 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
SSBP3-206ENST00000420121 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
SSBP3-206ENST00000420121 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
SSBP3-206ENST00000420121 MT1GP13640 62 aa3.98□□□□□ -1.77
SSBP3-206ENST00000420121 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
SSBP3-206ENST00000420121 MT1MQ8N339 61 aa3.94□□□□□ -1.78
SSBP3-206ENST00000420121 MT1LQ93083 61 aa3.94□□□□□ -1.78
SSBP3-206ENST00000420121 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
SSBP3-206ENST00000420121 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
SSBP3-206ENST00000420121 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
SSBP3-206ENST00000420121 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
SSBP3-206ENST00000420121 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
SSBP3-206ENST00000420121 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
SSBP3-206ENST00000420121 TNP1P09430 55 aa3.83□□□□□ -1.8
SSBP3-206ENST00000420121 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
SSBP3-206ENST00000420121 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
SSBP3-206ENST00000420121 MT4P47944 62 aa3.81□□□□□ -1.8
SSBP3-206ENST00000420121 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
SSBP3-206ENST00000420121 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
SSBP3-206ENST00000420121 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
SSBP3-206ENST00000420121 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.81
SSBP3-206ENST00000420121 INE1O15225 51 aa3.7□□□□□ -1.82
SSBP3-206ENST00000420121 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
SSBP3-206ENST00000420121 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
SSBP3-206ENST00000420121 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
SSBP3-206ENST00000420121 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
SSBP3-206ENST00000420121 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
SSBP3-206ENST00000420121 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
SSBP3-206ENST00000420121 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
SSBP3-206ENST00000420121 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
SSBP3-206ENST00000420121 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
SSBP3-206ENST00000420121 MT1AP04731 61 aa3.34□□□□□ -1.87
SSBP3-206ENST00000420121 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
SSBP3-206ENST00000420121 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
SSBP3-206ENST00000420121 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
SSBP3-206ENST00000420121 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
SSBP3-206ENST00000420121 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
SSBP3-206ENST00000420121 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
SSBP3-206ENST00000420121 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
SSBP3-206ENST00000420121 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
SSBP3-206ENST00000420121 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
SSBP3-206ENST00000420121 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
SSBP3-206ENST00000420121 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
SSBP3-206ENST00000420121 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
SSBP3-206ENST00000420121 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
SSBP3-206ENST00000420121 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
SSBP3-206ENST00000420121 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
SSBP3-206ENST00000420121 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
SSBP3-206ENST00000420121 PRM1P04553 51 aa2.09□□□□□ -2.07
SSBP3-206ENST00000420121 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SSBP3-206ENST00000420121 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
SSBP3-206ENST00000420121 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms