RNA–Protein interactions for RNA: ENST00000416804.1

HLA-DPB1-210, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 1,361 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-210ENST00000416804 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
HLA-DPB1-210ENST00000416804 HMCN1Q96RW7 5635 aa5.93□□□□□ -1.46
HLA-DPB1-210ENST00000416804 A0A1B0GU69 56 aa5.93□□□□□ -1.46
HLA-DPB1-210ENST00000416804 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
HLA-DPB1-210ENST00000416804 UQCR11O14957 56 aa5.9□□□□□ -1.47
HLA-DPB1-210ENST00000416804 AHNAK2Q8IVF2 5795 aa5.88□□□□□ -1.47
HLA-DPB1-210ENST00000416804 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
HLA-DPB1-210ENST00000416804 MT1EP04732 61 aa5.85□□□□□ -1.47
HLA-DPB1-210ENST00000416804 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
HLA-DPB1-210ENST00000416804 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
HLA-DPB1-210ENST00000416804 MT4P47944 62 aa5.81□□□□□ -1.48
HLA-DPB1-210ENST00000416804 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
HLA-DPB1-210ENST00000416804 KRTAP5-10Q6L8G5 202 aa5.79□□□□□ -1.48
HLA-DPB1-210ENST00000416804 MT1GP13640 62 aa5.73□□□□□ -1.49
HLA-DPB1-210ENST00000416804 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
HLA-DPB1-210ENST00000416804 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
HLA-DPB1-210ENST00000416804 KRTAP5-7Q6L8G8 165 aa5.64□□□□□ -1.51
HLA-DPB1-210ENST00000416804 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
HLA-DPB1-210ENST00000416804 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
HLA-DPB1-210ENST00000416804 MT1MQ8N339 61 aa5.6□□□□□ -1.51
HLA-DPB1-210ENST00000416804 PRAC1Q96KF2 57 aa5.6□□□□□ -1.51
HLA-DPB1-210ENST00000416804 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
HLA-DPB1-210ENST00000416804 K7ERS5 55 aa5.57□□□□□ -1.52
HLA-DPB1-210ENST00000416804 A0A1B0GU33 70 aa5.56□□□□□ -1.52
HLA-DPB1-210ENST00000416804 A0A0D9SG42 100 aa5.55□□□□□ -1.52
HLA-DPB1-210ENST00000416804 KRTAP13-4Q3LI77 160 aa5.52□□□□□ -1.53
HLA-DPB1-210ENST00000416804 MT1LQ93083 61 aa5.5□□□□□ -1.53
HLA-DPB1-210ENST00000416804 KRTAP25-1Q3LHN0 102 aa5.49□□□□□ -1.53
HLA-DPB1-210ENST00000416804 KRTAP4-3Q9BYR4 195 aa5.45□□□□□ -1.54
HLA-DPB1-210ENST00000416804 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
HLA-DPB1-210ENST00000416804 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
HLA-DPB1-210ENST00000416804 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
HLA-DPB1-210ENST00000416804 ROMO1P60602 79 aa5.35□□□□□ -1.55
HLA-DPB1-210ENST00000416804 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
HLA-DPB1-210ENST00000416804 SPINT4Q6UDR6 99 aa5.29□□□□□ -1.56
HLA-DPB1-210ENST00000416804 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
HLA-DPB1-210ENST00000416804 H3BS24 57 aa5.26□□□□□ -1.57
HLA-DPB1-210ENST00000416804 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
HLA-DPB1-210ENST00000416804 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
HLA-DPB1-210ENST00000416804 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
HLA-DPB1-210ENST00000416804 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
HLA-DPB1-210ENST00000416804 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
HLA-DPB1-210ENST00000416804 TNP1P09430 55 aa5.12□□□□□ -1.59
HLA-DPB1-210ENST00000416804 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
HLA-DPB1-210ENST00000416804 AHNAKQ09666 5890 aaKnown RBP5.01□□□□□ -1.61
HLA-DPB1-210ENST00000416804 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
HLA-DPB1-210ENST00000416804 MUC5ACP98088 5654 aa4.95□□□□□ -1.62
HLA-DPB1-210ENST00000416804 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
HLA-DPB1-210ENST00000416804 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
HLA-DPB1-210ENST00000416804 KRTAP5-8O75690 187 aa4.84□□□□□ -1.63
HLA-DPB1-210ENST00000416804 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
HLA-DPB1-210ENST00000416804 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
HLA-DPB1-210ENST00000416804 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
HLA-DPB1-210ENST00000416804 MT1AP04731 61 aa4.68□□□□□ -1.66
HLA-DPB1-210ENST00000416804 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
HLA-DPB1-210ENST00000416804 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
HLA-DPB1-210ENST00000416804 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
HLA-DPB1-210ENST00000416804 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
HLA-DPB1-210ENST00000416804 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
HLA-DPB1-210ENST00000416804 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
HLA-DPB1-210ENST00000416804 MT3P25713 68 aa4.32□□□□□ -1.72
HLA-DPB1-210ENST00000416804 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
HLA-DPB1-210ENST00000416804 INE1O15225 51 aa4.2□□□□□ -1.74
HLA-DPB1-210ENST00000416804 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
HLA-DPB1-210ENST00000416804 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
HLA-DPB1-210ENST00000416804 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
HLA-DPB1-210ENST00000416804 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
HLA-DPB1-210ENST00000416804 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
HLA-DPB1-210ENST00000416804 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
HLA-DPB1-210ENST00000416804 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
HLA-DPB1-210ENST00000416804 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
HLA-DPB1-210ENST00000416804 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
HLA-DPB1-210ENST00000416804 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.92
HLA-DPB1-210ENST00000416804 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
HLA-DPB1-210ENST00000416804 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
HLA-DPB1-210ENST00000416804 PRM1P04553 51 aa2.76□□□□□ -1.97
HLA-DPB1-210ENST00000416804 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
HLA-DPB1-210ENST00000416804 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 104 ms