RNA–Protein interactions for RNA: ENST00000416177.1

ABCB1-202, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-202ENST00000416177 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
ABCB1-202ENST00000416177 SPANXA2-OT1Q8N9U9 137 aa4.13□□□□□ -1.75
ABCB1-202ENST00000416177 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
ABCB1-202ENST00000416177 ROMO1P60602 79 aa4.11□□□□□ -1.75
ABCB1-202ENST00000416177 KRTAP2-1Q9BYU5 128 aa4.07□□□□□ -1.76
ABCB1-202ENST00000416177 CYSTM1Q9H1C7 97 aa4.07□□□□□ -1.76
ABCB1-202ENST00000416177 H7BZZ5 65 aa4.06□□□□□ -1.76
ABCB1-202ENST00000416177 SNURFQ9Y675 71 aa4.06□□□□□ -1.76
ABCB1-202ENST00000416177 SPRR2DP22532 72 aa4.05□□□□□ -1.76
ABCB1-202ENST00000416177 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
ABCB1-202ENST00000416177 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
ABCB1-202ENST00000416177 COA5Q86WW8 74 aa3.95□□□□□ -1.78
ABCB1-202ENST00000416177 KRTAP13-4Q3LI77 160 aa3.94□□□□□ -1.78
ABCB1-202ENST00000416177 A0A1B0GU33 70 aa3.93□□□□□ -1.78
ABCB1-202ENST00000416177 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
ABCB1-202ENST00000416177 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
ABCB1-202ENST00000416177 MT3P25713 68 aa3.88□□□□□ -1.79
ABCB1-202ENST00000416177 A0A0D9SG42 100 aa3.83□□□□□ -1.8
ABCB1-202ENST00000416177 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
ABCB1-202ENST00000416177 SPINT4Q6UDR6 99 aa3.83□□□□□ -1.8
ABCB1-202ENST00000416177 SPATA8Q6RVD6 105 aa3.82□□□□□ -1.8
ABCB1-202ENST00000416177 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
ABCB1-202ENST00000416177 MT1EP04732 61 aa3.81□□□□□ -1.8
ABCB1-202ENST00000416177 A0A1B0GU69 56 aa3.79□□□□□ -1.8
ABCB1-202ENST00000416177 KRTAP12-1P59990 96 aa3.79□□□□□ -1.8
ABCB1-202ENST00000416177 A8MU10 97 aa3.78□□□□□ -1.8
ABCB1-202ENST00000416177 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
ABCB1-202ENST00000416177 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
ABCB1-202ENST00000416177 MT1GP13640 62 aa3.75□□□□□ -1.81
ABCB1-202ENST00000416177 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
ABCB1-202ENST00000416177 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
ABCB1-202ENST00000416177 PRR15LQ9BU68 103 aa3.71□□□□□ -1.82
ABCB1-202ENST00000416177 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
ABCB1-202ENST00000416177 TNP1P09430 55 aa3.69□□□□□ -1.82
ABCB1-202ENST00000416177 MT1MQ8N339 61 aa3.63□□□□□ -1.83
ABCB1-202ENST00000416177 MT1LQ93083 61 aa3.63□□□□□ -1.83
ABCB1-202ENST00000416177 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
ABCB1-202ENST00000416177 LINC01558Q9Y6Z2 57 aa3.61□□□□□ -1.83
ABCB1-202ENST00000416177 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
ABCB1-202ENST00000416177 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
ABCB1-202ENST00000416177 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
ABCB1-202ENST00000416177 UQCR11O14957 56 aa3.57□□□□□ -1.84
ABCB1-202ENST00000416177 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
ABCB1-202ENST00000416177 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
ABCB1-202ENST00000416177 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
ABCB1-202ENST00000416177 MT4P47944 62 aa3.5□□□□□ -1.85
ABCB1-202ENST00000416177 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
ABCB1-202ENST00000416177 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
ABCB1-202ENST00000416177 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
ABCB1-202ENST00000416177 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
ABCB1-202ENST00000416177 INE1O15225 51 aa3.39□□□□□ -1.87
ABCB1-202ENST00000416177 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
ABCB1-202ENST00000416177 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
ABCB1-202ENST00000416177 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
ABCB1-202ENST00000416177 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
ABCB1-202ENST00000416177 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
ABCB1-202ENST00000416177 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
ABCB1-202ENST00000416177 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
ABCB1-202ENST00000416177 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
ABCB1-202ENST00000416177 MT1AP04731 61 aa3.12□□□□□ -1.91
ABCB1-202ENST00000416177 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
ABCB1-202ENST00000416177 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
ABCB1-202ENST00000416177 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
ABCB1-202ENST00000416177 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
ABCB1-202ENST00000416177 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
ABCB1-202ENST00000416177 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
ABCB1-202ENST00000416177 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
ABCB1-202ENST00000416177 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
ABCB1-202ENST00000416177 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
ABCB1-202ENST00000416177 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
ABCB1-202ENST00000416177 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
ABCB1-202ENST00000416177 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
ABCB1-202ENST00000416177 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
ABCB1-202ENST00000416177 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
ABCB1-202ENST00000416177 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
ABCB1-202ENST00000416177 PRM1P04553 51 aa1.58□□□□□ -2.16
ABCB1-202ENST00000416177 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
ABCB1-202ENST00000416177 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 331 ms