RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
CHRNA1-206ENST00000416004 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
CHRNA1-206ENST00000416004 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
CHRNA1-206ENST00000416004 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
CHRNA1-206ENST00000416004 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
CHRNA1-206ENST00000416004 MT1XP80297 61 aa3.81□□□□□ -1.8
CHRNA1-206ENST00000416004 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
CHRNA1-206ENST00000416004 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
CHRNA1-206ENST00000416004 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
CHRNA1-206ENST00000416004 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
CHRNA1-206ENST00000416004 INE1O15225 51 aa3.69□□□□□ -1.82
CHRNA1-206ENST00000416004 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
CHRNA1-206ENST00000416004 NEBP20929 6669 aa3.67□□□□□ -1.82
CHRNA1-206ENST00000416004 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
CHRNA1-206ENST00000416004 TNP1P09430 55 aa3.66□□□□□ -1.82
CHRNA1-206ENST00000416004 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
CHRNA1-206ENST00000416004 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
CHRNA1-206ENST00000416004 SPRR2EP22531 72 aa3.63□□□□□ -1.83
CHRNA1-206ENST00000416004 SPRR2BP35325 72 aa3.63□□□□□ -1.83
CHRNA1-206ENST00000416004 SPRR2AP35326 72 aa3.63□□□□□ -1.83
CHRNA1-206ENST00000416004 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
CHRNA1-206ENST00000416004 KMT2DO14686 5537 aa3.59□□□□□ -1.83
CHRNA1-206ENST00000416004 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
CHRNA1-206ENST00000416004 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
CHRNA1-206ENST00000416004 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
CHRNA1-206ENST00000416004 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
CHRNA1-206ENST00000416004 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
CHRNA1-206ENST00000416004 SPRR2DP22532 72 aa3.52□□□□□ -1.85
CHRNA1-206ENST00000416004 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
CHRNA1-206ENST00000416004 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
CHRNA1-206ENST00000416004 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
CHRNA1-206ENST00000416004 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
CHRNA1-206ENST00000416004 KRTAP19-7Q3SYF9 63 aa3.41□□□□□ -1.86
CHRNA1-206ENST00000416004 MT1EP04732 61 aa3.35□□□□□ -1.87
CHRNA1-206ENST00000416004 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
CHRNA1-206ENST00000416004 MT1GP13640 62 aa3.28□□□□□ -1.88
CHRNA1-206ENST00000416004 MT1LQ93083 61 aa3.26□□□□□ -1.89
CHRNA1-206ENST00000416004 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
CHRNA1-206ENST00000416004 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
CHRNA1-206ENST00000416004 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
CHRNA1-206ENST00000416004 MT1MQ8N339 61 aa3.18□□□□□ -1.9
CHRNA1-206ENST00000416004 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
CHRNA1-206ENST00000416004 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
CHRNA1-206ENST00000416004 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
CHRNA1-206ENST00000416004 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
CHRNA1-206ENST00000416004 MT4P47944 62 aa3.05□□□□□ -1.92
CHRNA1-206ENST00000416004 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
CHRNA1-206ENST00000416004 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
CHRNA1-206ENST00000416004 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
CHRNA1-206ENST00000416004 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
CHRNA1-206ENST00000416004 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
CHRNA1-206ENST00000416004 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.96
CHRNA1-206ENST00000416004 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
CHRNA1-206ENST00000416004 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
CHRNA1-206ENST00000416004 MT1AP04731 61 aa2.76□□□□□ -1.97
CHRNA1-206ENST00000416004 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
CHRNA1-206ENST00000416004 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
CHRNA1-206ENST00000416004 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
CHRNA1-206ENST00000416004 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
CHRNA1-206ENST00000416004 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
CHRNA1-206ENST00000416004 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
CHRNA1-206ENST00000416004 MT3P25713 68 aa2.54□□□□□ -2
CHRNA1-206ENST00000416004 OBSCNQ5VST9 7968 aa2.53□□□□□ -2
CHRNA1-206ENST00000416004 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
CHRNA1-206ENST00000416004 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
CHRNA1-206ENST00000416004 PRM1P04553 51 aa2.39□□□□□ -2.03
CHRNA1-206ENST00000416004 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
CHRNA1-206ENST00000416004 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
CHRNA1-206ENST00000416004 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
CHRNA1-206ENST00000416004 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
CHRNA1-206ENST00000416004 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
CHRNA1-206ENST00000416004 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
CHRNA1-206ENST00000416004 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
CHRNA1-206ENST00000416004 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CHRNA1-206ENST00000416004 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
CHRNA1-206ENST00000416004 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
CHRNA1-206ENST00000416004 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
CHRNA1-206ENST00000416004 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 57.8 ms