RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ROMO1P60602 79 aa5.12□□□□□ -1.59
CNN3-203ENST00000415017 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
CNN3-203ENST00000415017 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
CNN3-203ENST00000415017 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
CNN3-203ENST00000415017 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
CNN3-203ENST00000415017 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
CNN3-203ENST00000415017 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
CNN3-203ENST00000415017 H3BS24 57 aa4.94□□□□□ -1.62
CNN3-203ENST00000415017 SPRR2FQ96RM1 72 aa4.94□□□□□ -1.62
CNN3-203ENST00000415017 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
CNN3-203ENST00000415017 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
CNN3-203ENST00000415017 GPR98Q8WXG9 6306 aa4.92□□□□□ -1.62
CNN3-203ENST00000415017 MT1EP04732 61 aa4.91□□□□□ -1.62
CNN3-203ENST00000415017 PP632Q6XCG6 107 aa4.88□□□□□ -1.63
CNN3-203ENST00000415017 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
CNN3-203ENST00000415017 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
CNN3-203ENST00000415017 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
CNN3-203ENST00000415017 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
CNN3-203ENST00000415017 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
CNN3-203ENST00000415017 KTN1-AS1Q86SY8 53 aa4.78□□□□□ -1.64
CNN3-203ENST00000415017 SPRR2EP22531 72 aa4.76□□□□□ -1.65
CNN3-203ENST00000415017 SPRR2BP35325 72 aa4.76□□□□□ -1.65
CNN3-203ENST00000415017 SPRR2AP35326 72 aa4.76□□□□□ -1.65
CNN3-203ENST00000415017 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
CNN3-203ENST00000415017 MT1LQ93083 61 aa4.76□□□□□ -1.65
CNN3-203ENST00000415017 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
CNN3-203ENST00000415017 MT1GP13640 62 aa4.71□□□□□ -1.66
CNN3-203ENST00000415017 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
CNN3-203ENST00000415017 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
CNN3-203ENST00000415017 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
CNN3-203ENST00000415017 MT1MQ8N339 61 aa4.63□□□□□ -1.67
CNN3-203ENST00000415017 SPRR2DP22532 72 aa4.6□□□□□ -1.67
CNN3-203ENST00000415017 SVIPQ8NHG7 77 aa4.54□□□□□ -1.68
CNN3-203ENST00000415017 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
CNN3-203ENST00000415017 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
CNN3-203ENST00000415017 DSTQ03001 7570 aaKnown RBP4.44□□□□□ -1.7
CNN3-203ENST00000415017 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
CNN3-203ENST00000415017 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
CNN3-203ENST00000415017 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
CNN3-203ENST00000415017 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
CNN3-203ENST00000415017 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
CNN3-203ENST00000415017 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
CNN3-203ENST00000415017 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
CNN3-203ENST00000415017 MT1AP04731 61 aa4.06□□□□□ -1.76
CNN3-203ENST00000415017 HMCN1Q96RW7 5635 aa4.04□□□□□ -1.76
CNN3-203ENST00000415017 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
CNN3-203ENST00000415017 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
CNN3-203ENST00000415017 MT4P47944 62 aa3.96□□□□□ -1.78
CNN3-203ENST00000415017 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
CNN3-203ENST00000415017 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
CNN3-203ENST00000415017 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
CNN3-203ENST00000415017 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
CNN3-203ENST00000415017 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
CNN3-203ENST00000415017 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
CNN3-203ENST00000415017 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
CNN3-203ENST00000415017 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
CNN3-203ENST00000415017 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
CNN3-203ENST00000415017 MT3P25713 68 aa3.67□□□□□ -1.82
CNN3-203ENST00000415017 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
CNN3-203ENST00000415017 MUC5ACP98088 5654 aa3.58□□□□□ -1.84
CNN3-203ENST00000415017 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
CNN3-203ENST00000415017 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
CNN3-203ENST00000415017 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
CNN3-203ENST00000415017 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
CNN3-203ENST00000415017 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
CNN3-203ENST00000415017 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
CNN3-203ENST00000415017 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
CNN3-203ENST00000415017 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
CNN3-203ENST00000415017 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
CNN3-203ENST00000415017 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
CNN3-203ENST00000415017 INE1O15225 51 aa3.02□□□□□ -1.93
CNN3-203ENST00000415017 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
CNN3-203ENST00000415017 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
CNN3-203ENST00000415017 PRM1P04553 51 aa2.63□□□□□ -1.99
CNN3-203ENST00000415017 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
CNN3-203ENST00000415017 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
CNN3-203ENST00000415017 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
CNN3-203ENST00000415017 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 681.8 ms