RNA–Protein interactions for RNA: ENST00000413971.5

TOP2B-202, Transcript of DNA topoisomerase II beta, humanhuman

TSL 5

Gene TOP2B, Length 2,049 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-202ENST00000413971 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
TOP2B-202ENST00000413971 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
TOP2B-202ENST00000413971 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
TOP2B-202ENST00000413971 KRTAP12-3P60328 96 aa1.59□□□□□ -2.16
TOP2B-202ENST00000413971 KRTAP19-8Q3LI54 63 aa1.59□□□□□ -2.16
TOP2B-202ENST00000413971 GNG13Q9P2W3 67 aa1.58□□□□□ -2.16
TOP2B-202ENST00000413971 OBSCNQ5VST9 7968 aa1.58□□□□□ -2.16
TOP2B-202ENST00000413971 C3orf79P0CE67 100 aa1.57□□□□□ -2.16
TOP2B-202ENST00000413971 I3L3M4 83 aa1.56□□□□□ -2.16
TOP2B-202ENST00000413971 RPL39LQ96EH5 51 aaKnown RBP1.55□□□□□ -2.16
TOP2B-202ENST00000413971 NDUFB1O75438 58 aa1.54□□□□□ -2.16
TOP2B-202ENST00000413971 NREPQ16612 68 aa1.54□□□□□ -2.16
TOP2B-202ENST00000413971 ATXN8Q156A1 80 aa1.52□□□□□ -2.17
TOP2B-202ENST00000413971 TOMM7Q9P0U1 55 aa1.52□□□□□ -2.17
TOP2B-202ENST00000413971 SPRR2GQ9BYE4 73 aa1.52□□□□□ -2.17
TOP2B-202ENST00000413971 LCE3AQ5TA76 89 aa1.51□□□□□ -2.17
TOP2B-202ENST00000413971 Q8IZM0 81 aa1.5□□□□□ -2.17
TOP2B-202ENST00000413971 COX7BP24311 80 aa1.5□□□□□ -2.17
TOP2B-202ENST00000413971 CRIPTQ9P021 101 aa1.5□□□□□ -2.17
TOP2B-202ENST00000413971 POLR2KP53803 58 aaKnown RBP1.49□□□□□ -2.17
TOP2B-202ENST00000413971 SPRR1AP35321 89 aa1.49□□□□□ -2.17
TOP2B-202ENST00000413971 TMEM167BQ9NRX6 74 aa1.49□□□□□ -2.17
TOP2B-202ENST00000413971 ETDCA0A1B0GVM5 59 aa1.48□□□□□ -2.17
TOP2B-202ENST00000413971 FCER1GP30273 86 aa1.48□□□□□ -2.17
TOP2B-202ENST00000413971 C10orf95Q9H7T3 257 aa1.48□□□□□ -2.17
TOP2B-202ENST00000413971 LINC01549A6NIU2 74 aa1.45□□□□□ -2.18
TOP2B-202ENST00000413971 RPL39P62891 51 aaKnown RBP1.45□□□□□ -2.18
TOP2B-202ENST00000413971 KRTAP20-2Q3LI61 65 aa1.45□□□□□ -2.18
TOP2B-202ENST00000413971 KCNQ1DNQ9H478 68 aa1.45□□□□□ -2.18
TOP2B-202ENST00000413971 MT1XP80297 61 aa1.45□□□□□ -2.18
TOP2B-202ENST00000413971 CNFNQ9BYD5 112 aa1.45□□□□□ -2.18
TOP2B-202ENST00000413971 TP53AIP1Q9HCN2 124 aa1.44□□□□□ -2.18
TOP2B-202ENST00000413971 A0A0D9SG42 100 aa1.42□□□□□ -2.18
TOP2B-202ENST00000413971 SPRR1BP22528 89 aa1.42□□□□□ -2.18
TOP2B-202ENST00000413971 CDKN2A-AS1Q9UH64 79 aa1.42□□□□□ -2.18
TOP2B-202ENST00000413971 TOMM5Q8N4H5 51 aa1.41□□□□□ -2.18
TOP2B-202ENST00000413971 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.18
TOP2B-202ENST00000413971 K7EQZ3 153 aa1.4□□□□□ -2.19
TOP2B-202ENST00000413971 KRTAP5-5Q701N2 237 aaPredicted RBP1.39□□□□□ -2.19
TOP2B-202ENST00000413971 SERF2P84101 59 aa1.38□□□□□ -2.19
TOP2B-202ENST00000413971 H1FX-AS1Q4G0G2 97 aa1.37□□□□□ -2.19
TOP2B-202ENST00000413971 UBL5Q9BZL1 73 aa1.37□□□□□ -2.19
TOP2B-202ENST00000413971 WFDC13Q8IUB5 93 aa1.37□□□□□ -2.19
TOP2B-202ENST00000413971 K7EMI3 77 aa1.36□□□□□ -2.19
TOP2B-202ENST00000413971 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
TOP2B-202ENST00000413971 SMIM2Q9BVW6 85 aa1.34□□□□□ -2.19
TOP2B-202ENST00000413971 MRPL34Q9BQ48 92 aaKnown RBP1.33□□□□□ -2.2
TOP2B-202ENST00000413971 LINC00158P58513 81 aa1.33□□□□□ -2.2
TOP2B-202ENST00000413971 DEFB105AQ8NG35 78 aa1.33□□□□□ -2.2
TOP2B-202ENST00000413971 H0YAA0 97 aa1.32□□□□□ -2.2
TOP2B-202ENST00000413971 MT1GP13640 62 aa1.32□□□□□ -2.2
TOP2B-202ENST00000413971 IGIPA6NJ69 53 aa1.31□□□□□ -2.2
TOP2B-202ENST00000413971 MT1EP04732 61 aa1.31□□□□□ -2.2
TOP2B-202ENST00000413971 LCE1CQ5T751 118 aa1.31□□□□□ -2.2
TOP2B-202ENST00000413971 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
TOP2B-202ENST00000413971 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
TOP2B-202ENST00000413971 MT1MQ8N339 61 aa1.28□□□□□ -2.2
TOP2B-202ENST00000413971 IGLV5-48A0A075B6I7 105 aa1.27□□□□□ -2.21
TOP2B-202ENST00000413971 S4R3F8 94 aa1.19□□□□□ -2.22
TOP2B-202ENST00000413971 MT1LQ93083 61 aa1.17□□□□□ -2.22
TOP2B-202ENST00000413971 SMIM27A0A1W2PRY6 76 aa1.16□□□□□ -2.22
TOP2B-202ENST00000413971 KRTAP19-5Q3LI72 72 aa1.13□□□□□ -2.23
TOP2B-202ENST00000413971 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
TOP2B-202ENST00000413971 PLNP26678 52 aa1.11□□□□□ -2.23
TOP2B-202ENST00000413971 LINC01546A6NGU7 62 aa1.1□□□□□ -2.23
TOP2B-202ENST00000413971 LINC00308Q8TCZ7 52 aa1.08□□□□□ -2.24
TOP2B-202ENST00000413971 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
TOP2B-202ENST00000413971 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
TOP2B-202ENST00000413971 H0YGX0 51 aa1.05□□□□□ -2.24
TOP2B-202ENST00000413971 M0QZ58 72 aa1.04□□□□□ -2.24
TOP2B-202ENST00000413971 KRTAP6-1Q3LI64 71 aa1.01□□□□□ -2.25
TOP2B-202ENST00000413971 MT1AP04731 61 aa0.99□□□□□ -2.25
TOP2B-202ENST00000413971 MMP24-AS1A0A0U1RRL7 71 aa0.94□□□□□ -2.26
TOP2B-202ENST00000413971 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
TOP2B-202ENST00000413971 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
TOP2B-202ENST00000413971 PRM1P04553 51 aa0.81□□□□□ -2.28
TOP2B-202ENST00000413971 TNP1P09430 55 aa0.72□□□□□ -2.29
TOP2B-202ENST00000413971 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 203.5 ms