RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 MT3P25713 68 aa3.51□□□□□ -1.85
GPC3-203ENST00000406757 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
GPC3-203ENST00000406757 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
GPC3-203ENST00000406757 MT1XP80297 61 aa3.48□□□□□ -1.85
GPC3-203ENST00000406757 CAMK2N1Q7Z7J9 78 aa3.48□□□□□ -1.85
GPC3-203ENST00000406757 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
GPC3-203ENST00000406757 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
GPC3-203ENST00000406757 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
GPC3-203ENST00000406757 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
GPC3-203ENST00000406757 BRK1Q8WUW1 75 aa3.4□□□□□ -1.87
GPC3-203ENST00000406757 K7ERS5 55 aa3.39□□□□□ -1.87
GPC3-203ENST00000406757 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
GPC3-203ENST00000406757 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
GPC3-203ENST00000406757 SPRR2EP22531 72 aa3.37□□□□□ -1.87
GPC3-203ENST00000406757 SPRR2BP35325 72 aa3.37□□□□□ -1.87
GPC3-203ENST00000406757 SPRR2AP35326 72 aa3.37□□□□□ -1.87
GPC3-203ENST00000406757 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
GPC3-203ENST00000406757 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
GPC3-203ENST00000406757 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
GPC3-203ENST00000406757 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
GPC3-203ENST00000406757 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
GPC3-203ENST00000406757 TNP1P09430 55 aa3.26□□□□□ -1.89
GPC3-203ENST00000406757 SPRR2DP22532 72 aa3.26□□□□□ -1.89
GPC3-203ENST00000406757 ROMO1P60602 79 aa3.25□□□□□ -1.89
GPC3-203ENST00000406757 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
GPC3-203ENST00000406757 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
GPC3-203ENST00000406757 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
GPC3-203ENST00000406757 PMAIP1Q13794 54 aa3.2□□□□□ -1.9
GPC3-203ENST00000406757 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
GPC3-203ENST00000406757 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
GPC3-203ENST00000406757 PRO0628Q9UI54 55 aa3.18□□□□□ -1.9
GPC3-203ENST00000406757 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
GPC3-203ENST00000406757 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
GPC3-203ENST00000406757 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
GPC3-203ENST00000406757 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
GPC3-203ENST00000406757 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
GPC3-203ENST00000406757 MT1EP04732 61 aa3.06□□□□□ -1.92
GPC3-203ENST00000406757 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
GPC3-203ENST00000406757 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
GPC3-203ENST00000406757 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
GPC3-203ENST00000406757 KTN1-AS1Q86SY8 53 aa2.98□□□□□ -1.93
GPC3-203ENST00000406757 MT1LQ93083 61 aa2.97□□□□□ -1.93
GPC3-203ENST00000406757 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
GPC3-203ENST00000406757 MT1GP13640 62 aa2.9□□□□□ -1.95
GPC3-203ENST00000406757 MT1MQ8N339 61 aa2.9□□□□□ -1.95
GPC3-203ENST00000406757 KRTAP4-3Q9BYR4 195 aa2.9□□□□□ -1.95
GPC3-203ENST00000406757 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
GPC3-203ENST00000406757 MT4P47944 62 aa2.88□□□□□ -1.95
GPC3-203ENST00000406757 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
GPC3-203ENST00000406757 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
GPC3-203ENST00000406757 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
GPC3-203ENST00000406757 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
GPC3-203ENST00000406757 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
GPC3-203ENST00000406757 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
GPC3-203ENST00000406757 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
GPC3-203ENST00000406757 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
GPC3-203ENST00000406757 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
GPC3-203ENST00000406757 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
GPC3-203ENST00000406757 KRTAP12-4P60329 112 aa2.55□□□□□ -2
GPC3-203ENST00000406757 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
GPC3-203ENST00000406757 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
GPC3-203ENST00000406757 MT1AP04731 61 aa2.52□□□□□ -2.01
GPC3-203ENST00000406757 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
GPC3-203ENST00000406757 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
GPC3-203ENST00000406757 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
GPC3-203ENST00000406757 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
GPC3-203ENST00000406757 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
GPC3-203ENST00000406757 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
GPC3-203ENST00000406757 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
GPC3-203ENST00000406757 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
GPC3-203ENST00000406757 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
GPC3-203ENST00000406757 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
GPC3-203ENST00000406757 INE1O15225 51 aa1.84□□□□□ -2.11
GPC3-203ENST00000406757 PRM1P04553 51 aa1.71□□□□□ -2.14
GPC3-203ENST00000406757 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
GPC3-203ENST00000406757 PHGR1C9JFL3 82 aa1.65□□□□□ -2.15
GPC3-203ENST00000406757 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
GPC3-203ENST00000406757 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 5.4 ms