RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
RPAIN-204ENST00000405578 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
RPAIN-204ENST00000405578 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
RPAIN-204ENST00000405578 A0A0D9SG42 100 aa4.47□□□□□ -1.69
RPAIN-204ENST00000405578 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
RPAIN-204ENST00000405578 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
RPAIN-204ENST00000405578 SPINT4Q6UDR6 99 aa4.4□□□□□ -1.71
RPAIN-204ENST00000405578 MT1XP80297 61 aa4.38□□□□□ -1.71
RPAIN-204ENST00000405578 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
RPAIN-204ENST00000405578 SPRR2DP22532 72 aa4.37□□□□□ -1.71
RPAIN-204ENST00000405578 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
RPAIN-204ENST00000405578 K7ERS5 55 aa4.34□□□□□ -1.71
RPAIN-204ENST00000405578 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
RPAIN-204ENST00000405578 KRTAP12-2P59991 146 aa4.31□□□□□ -1.72
RPAIN-204ENST00000405578 ROMO1P60602 79 aa4.3□□□□□ -1.72
RPAIN-204ENST00000405578 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
RPAIN-204ENST00000405578 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
RPAIN-204ENST00000405578 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
RPAIN-204ENST00000405578 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
RPAIN-204ENST00000405578 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
RPAIN-204ENST00000405578 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
RPAIN-204ENST00000405578 TNP1P09430 55 aa4.13□□□□□ -1.75
RPAIN-204ENST00000405578 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
RPAIN-204ENST00000405578 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
RPAIN-204ENST00000405578 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
RPAIN-204ENST00000405578 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
RPAIN-204ENST00000405578 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
RPAIN-204ENST00000405578 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
RPAIN-204ENST00000405578 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.78
RPAIN-204ENST00000405578 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.79
RPAIN-204ENST00000405578 KRTAP19-7Q3SYF9 63 aa3.9□□□□□ -1.79
RPAIN-204ENST00000405578 MT1EP04732 61 aa3.88□□□□□ -1.79
RPAIN-204ENST00000405578 MT4P47944 62 aa3.87□□□□□ -1.79
RPAIN-204ENST00000405578 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
RPAIN-204ENST00000405578 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
RPAIN-204ENST00000405578 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
RPAIN-204ENST00000405578 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
RPAIN-204ENST00000405578 MT1GP13640 62 aa3.76□□□□□ -1.81
RPAIN-204ENST00000405578 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
RPAIN-204ENST00000405578 MT1LQ93083 61 aa3.75□□□□□ -1.81
RPAIN-204ENST00000405578 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
RPAIN-204ENST00000405578 MT1MQ8N339 61 aa3.67□□□□□ -1.82
RPAIN-204ENST00000405578 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
RPAIN-204ENST00000405578 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
RPAIN-204ENST00000405578 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
RPAIN-204ENST00000405578 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
RPAIN-204ENST00000405578 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
RPAIN-204ENST00000405578 INE1O15225 51 aa3.36□□□□□ -1.87
RPAIN-204ENST00000405578 MUC5ACP98088 5654 aa3.33□□□□□ -1.88
RPAIN-204ENST00000405578 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
RPAIN-204ENST00000405578 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
RPAIN-204ENST00000405578 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
RPAIN-204ENST00000405578 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
RPAIN-204ENST00000405578 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
RPAIN-204ENST00000405578 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
RPAIN-204ENST00000405578 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
RPAIN-204ENST00000405578 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
RPAIN-204ENST00000405578 MT1AP04731 61 aa3.2□□□□□ -1.9
RPAIN-204ENST00000405578 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
RPAIN-204ENST00000405578 MT3P25713 68 aa3.17□□□□□ -1.9
RPAIN-204ENST00000405578 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
RPAIN-204ENST00000405578 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
RPAIN-204ENST00000405578 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
RPAIN-204ENST00000405578 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
RPAIN-204ENST00000405578 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
RPAIN-204ENST00000405578 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
RPAIN-204ENST00000405578 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
RPAIN-204ENST00000405578 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
RPAIN-204ENST00000405578 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
RPAIN-204ENST00000405578 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
RPAIN-204ENST00000405578 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
RPAIN-204ENST00000405578 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
RPAIN-204ENST00000405578 PRM1P04553 51 aa2.21□□□□□ -2.06
RPAIN-204ENST00000405578 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
RPAIN-204ENST00000405578 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
RPAIN-204ENST00000405578 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
RPAIN-204ENST00000405578 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 118.9 ms