RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 SPRR1AP35321 89 aa1.7□□□□□ -2.14
CLHC1-201ENST00000401408 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
CLHC1-201ENST00000401408 NEBP20929 6669 aa1.69□□□□□ -2.14
CLHC1-201ENST00000401408 SPRR5A0A1B0GTR4 108 aa1.68□□□□□ -2.14
CLHC1-201ENST00000401408 KRTAP20-1Q3LI63 56 aa1.68□□□□□ -2.14
CLHC1-201ENST00000401408 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
CLHC1-201ENST00000401408 TOMM7Q9P0U1 55 aa1.67□□□□□ -2.14
CLHC1-201ENST00000401408 A0A096LNI7 61 aa1.67□□□□□ -2.14
CLHC1-201ENST00000401408 PRLHP81277 87 aa1.66□□□□□ -2.14
CLHC1-201ENST00000401408 MDN1Q9NU22 5596 aa1.65□□□□□ -2.15
CLHC1-201ENST00000401408 KRTAP13-3Q3SY46 172 aa1.65□□□□□ -2.15
CLHC1-201ENST00000401408 KRTAP19-6Q3LI70 58 aa1.64□□□□□ -2.15
CLHC1-201ENST00000401408 LCE3CQ5T5A8 94 aa1.64□□□□□ -2.15
CLHC1-201ENST00000401408 SPRR1BP22528 89 aa1.63□□□□□ -2.15
CLHC1-201ENST00000401408 KRTAP10-5P60370 271 aa1.63□□□□□ -2.15
CLHC1-201ENST00000401408 CLPSL2Q6UWE3 100 aa1.62□□□□□ -2.15
CLHC1-201ENST00000401408 KMT2DO14686 5537 aa1.62□□□□□ -2.15
CLHC1-201ENST00000401408 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
CLHC1-201ENST00000401408 S4R3F8 94 aa1.6□□□□□ -2.15
CLHC1-201ENST00000401408 KRTAP2-3P0C7H8 128 aa1.59□□□□□ -2.15
CLHC1-201ENST00000401408 KRTAP2-4Q9BYR9 128 aa1.59□□□□□ -2.15
CLHC1-201ENST00000401408 KRTAP10-10P60014 251 aa1.59□□□□□ -2.16
CLHC1-201ENST00000401408 KRTAP10-12P60413 245 aa1.59□□□□□ -2.16
CLHC1-201ENST00000401408 M0R2T5 61 aa1.58□□□□□ -2.16
CLHC1-201ENST00000401408 MT2AP02795 61 aa1.57□□□□□ -2.16
CLHC1-201ENST00000401408 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
CLHC1-201ENST00000401408 SPINK1P00995 79 aa1.56□□□□□ -2.16
CLHC1-201ENST00000401408 MT1FP04733 61 aa1.56□□□□□ -2.16
CLHC1-201ENST00000401408 KRTAP13-1Q8IUC0 172 aa1.55□□□□□ -2.16
CLHC1-201ENST00000401408 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
CLHC1-201ENST00000401408 KRTAP12-4P60329 112 aa1.52□□□□□ -2.17
CLHC1-201ENST00000401408 LCE3EQ5T5B0 92 aa1.52□□□□□ -2.17
CLHC1-201ENST00000401408 A0A0D9SG42 100 aa1.51□□□□□ -2.17
CLHC1-201ENST00000401408 RPS29P62273 56 aaKnown RBP1.5□□□□□ -2.17
CLHC1-201ENST00000401408 LCE3AQ5TA76 89 aa1.47□□□□□ -2.17
CLHC1-201ENST00000401408 LCE3DQ9BYE3 92 aa1.42□□□□□ -2.18
CLHC1-201ENST00000401408 C9orf92A6NGG3 77 aa1.42□□□□□ -2.18
CLHC1-201ENST00000401408 SPRR2EP22531 72 aa1.41□□□□□ -2.18
CLHC1-201ENST00000401408 SPRR2BP35325 72 aa1.41□□□□□ -2.18
CLHC1-201ENST00000401408 SPRR2AP35326 72 aa1.41□□□□□ -2.18
CLHC1-201ENST00000401408 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
CLHC1-201ENST00000401408 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
CLHC1-201ENST00000401408 MT1BP07438 61 aa1.38□□□□□ -2.19
CLHC1-201ENST00000401408 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
CLHC1-201ENST00000401408 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
CLHC1-201ENST00000401408 SPRR2DP22532 72 aa1.37□□□□□ -2.19
CLHC1-201ENST00000401408 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
CLHC1-201ENST00000401408 M0QZ58 72 aa1.36□□□□□ -2.19
CLHC1-201ENST00000401408 KRTAP19-8Q3LI54 63 aa1.34□□□□□ -2.2
CLHC1-201ENST00000401408 LCE1CQ5T751 118 aa1.34□□□□□ -2.2
CLHC1-201ENST00000401408 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.2
CLHC1-201ENST00000401408 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
CLHC1-201ENST00000401408 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
CLHC1-201ENST00000401408 SPRR2GQ9BYE4 73 aa1.29□□□□□ -2.2
CLHC1-201ENST00000401408 KRTAP8-1Q8IUC2 63 aa1.27□□□□□ -2.21
CLHC1-201ENST00000401408 TNP1P09430 55 aa1.23□□□□□ -2.21
CLHC1-201ENST00000401408 MT1XP80297 61 aa1.22□□□□□ -2.21
CLHC1-201ENST00000401408 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
CLHC1-201ENST00000401408 MT4P47944 62 aa1.21□□□□□ -2.22
CLHC1-201ENST00000401408 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
CLHC1-201ENST00000401408 KRTAP20-2Q3LI61 65 aa1.13□□□□□ -2.23
CLHC1-201ENST00000401408 KRTAP19-3Q7Z4W3 81 aa1.12□□□□□ -2.23
CLHC1-201ENST00000401408 KRTAP19-7Q3SYF9 63 aa1.11□□□□□ -2.23
CLHC1-201ENST00000401408 MT1EP04732 61 aa1.09□□□□□ -2.24
CLHC1-201ENST00000401408 PRM1P04553 51 aa1.08□□□□□ -2.24
CLHC1-201ENST00000401408 MT1GP13640 62 aa1.07□□□□□ -2.24
CLHC1-201ENST00000401408 MT1MQ8N339 61 aa1.05□□□□□ -2.24
CLHC1-201ENST00000401408 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
CLHC1-201ENST00000401408 SYNE1Q8NF91 8797 aaKnown RBP1.03□□□□□ -2.24
CLHC1-201ENST00000401408 MT1LQ93083 61 aa0.99□□□□□ -2.25
CLHC1-201ENST00000401408 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
CLHC1-201ENST00000401408 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
CLHC1-201ENST00000401408 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
CLHC1-201ENST00000401408 MT1AP04731 61 aa0.85□□□□□ -2.27
CLHC1-201ENST00000401408 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
CLHC1-201ENST00000401408 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
CLHC1-201ENST00000401408 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 60.4 ms