RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
NEDD9-203ENST00000397378 MT1XP80297 61 aa3.94□□□□□ -1.78
NEDD9-203ENST00000397378 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
NEDD9-203ENST00000397378 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
NEDD9-203ENST00000397378 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
NEDD9-203ENST00000397378 Q8N9L7 120 aa3.89□□□□□ -1.79
NEDD9-203ENST00000397378 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
NEDD9-203ENST00000397378 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
NEDD9-203ENST00000397378 H0YAA0 97 aa3.86□□□□□ -1.79
NEDD9-203ENST00000397378 A0A1B0GU69 56 aa3.84□□□□□ -1.79
NEDD9-203ENST00000397378 PLAC4Q8WY50 150 aa3.84□□□□□ -1.79
NEDD9-203ENST00000397378 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
NEDD9-203ENST00000397378 TP53AIP1Q9HCN2 124 aa3.83□□□□□ -1.8
NEDD9-203ENST00000397378 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
NEDD9-203ENST00000397378 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
NEDD9-203ENST00000397378 ACYP2P14621 99 aa3.79□□□□□ -1.8
NEDD9-203ENST00000397378 MT4P47944 62 aa3.79□□□□□ -1.8
NEDD9-203ENST00000397378 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
NEDD9-203ENST00000397378 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
NEDD9-203ENST00000397378 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
NEDD9-203ENST00000397378 A0A1B0GU33 70 aa3.76□□□□□ -1.81
NEDD9-203ENST00000397378 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
NEDD9-203ENST00000397378 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
NEDD9-203ENST00000397378 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
NEDD9-203ENST00000397378 R4GN34 69 aa3.72□□□□□ -1.81
NEDD9-203ENST00000397378 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
NEDD9-203ENST00000397378 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
NEDD9-203ENST00000397378 M0QZ58 72 aa3.66□□□□□ -1.82
NEDD9-203ENST00000397378 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
NEDD9-203ENST00000397378 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
NEDD9-203ENST00000397378 MT1EP04732 61 aa3.51□□□□□ -1.85
NEDD9-203ENST00000397378 KRTAP5-4Q6L8H1 288 aa3.5□□□□□ -1.85
NEDD9-203ENST00000397378 INE1O15225 51 aa3.45□□□□□ -1.86
NEDD9-203ENST00000397378 MT1GP13640 62 aa3.45□□□□□ -1.86
NEDD9-203ENST00000397378 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
NEDD9-203ENST00000397378 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
NEDD9-203ENST00000397378 MT1MQ8N339 61 aa3.37□□□□□ -1.87
NEDD9-203ENST00000397378 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
NEDD9-203ENST00000397378 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
NEDD9-203ENST00000397378 A0A0D9SG42 100 aa3.3□□□□□ -1.88
NEDD9-203ENST00000397378 MT1LQ93083 61 aa3.3□□□□□ -1.88
NEDD9-203ENST00000397378 KRTAP13-4Q3LI77 160 aa3.28□□□□□ -1.88
NEDD9-203ENST00000397378 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
NEDD9-203ENST00000397378 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
NEDD9-203ENST00000397378 C10orf95Q9H7T3 257 aa3.22□□□□□ -1.89
NEDD9-203ENST00000397378 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
NEDD9-203ENST00000397378 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
NEDD9-203ENST00000397378 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
NEDD9-203ENST00000397378 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
NEDD9-203ENST00000397378 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
NEDD9-203ENST00000397378 KRTAP12-1P59990 96 aa3.07□□□□□ -1.92
NEDD9-203ENST00000397378 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
NEDD9-203ENST00000397378 TNP1P09430 55 aa3.02□□□□□ -1.93
NEDD9-203ENST00000397378 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
NEDD9-203ENST00000397378 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
NEDD9-203ENST00000397378 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
NEDD9-203ENST00000397378 MT1AP04731 61 aa2.81□□□□□ -1.96
NEDD9-203ENST00000397378 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
NEDD9-203ENST00000397378 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
NEDD9-203ENST00000397378 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
NEDD9-203ENST00000397378 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
NEDD9-203ENST00000397378 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
NEDD9-203ENST00000397378 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
NEDD9-203ENST00000397378 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
NEDD9-203ENST00000397378 MT3P25713 68 aa2.58□□□□□ -2
NEDD9-203ENST00000397378 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
NEDD9-203ENST00000397378 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
NEDD9-203ENST00000397378 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
NEDD9-203ENST00000397378 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
NEDD9-203ENST00000397378 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
NEDD9-203ENST00000397378 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
NEDD9-203ENST00000397378 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
NEDD9-203ENST00000397378 PRM1P04553 51 aa1.87□□□□□ -2.11
NEDD9-203ENST00000397378 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
NEDD9-203ENST00000397378 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
NEDD9-203ENST00000397378 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
NEDD9-203ENST00000397378 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
NEDD9-203ENST00000397378 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms