RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
GAPDH-203ENST00000396858 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
GAPDH-203ENST00000396858 KRTAP8-1Q8IUC2 63 aa5.4□□□□□ -1.54
GAPDH-203ENST00000396858 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
GAPDH-203ENST00000396858 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
GAPDH-203ENST00000396858 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
GAPDH-203ENST00000396858 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
GAPDH-203ENST00000396858 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
GAPDH-203ENST00000396858 NEBP20929 6669 aa5.25□□□□□ -1.57
GAPDH-203ENST00000396858 PP632Q6XCG6 107 aa5.25□□□□□ -1.57
GAPDH-203ENST00000396858 KRTAP5-9P26371 169 aa5.24□□□□□ -1.57
GAPDH-203ENST00000396858 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
GAPDH-203ENST00000396858 MT1EP04732 61 aa5.2□□□□□ -1.58
GAPDH-203ENST00000396858 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
GAPDH-203ENST00000396858 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
GAPDH-203ENST00000396858 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
GAPDH-203ENST00000396858 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
GAPDH-203ENST00000396858 SPRR2EP22531 72 aa5.06□□□□□ -1.6
GAPDH-203ENST00000396858 SPRR2BP35325 72 aa5.06□□□□□ -1.6
GAPDH-203ENST00000396858 SPRR2AP35326 72 aa5.06□□□□□ -1.6
GAPDH-203ENST00000396858 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
GAPDH-203ENST00000396858 MT1LQ93083 61 aa5.05□□□□□ -1.6
GAPDH-203ENST00000396858 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
GAPDH-203ENST00000396858 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
GAPDH-203ENST00000396858 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
GAPDH-203ENST00000396858 MT1GP13640 62 aa4.91□□□□□ -1.62
GAPDH-203ENST00000396858 MT1MQ8N339 61 aa4.91□□□□□ -1.62
GAPDH-203ENST00000396858 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
GAPDH-203ENST00000396858 SPRR2DP22532 72 aa4.88□□□□□ -1.63
GAPDH-203ENST00000396858 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
GAPDH-203ENST00000396858 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
GAPDH-203ENST00000396858 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
GAPDH-203ENST00000396858 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
GAPDH-203ENST00000396858 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
GAPDH-203ENST00000396858 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
GAPDH-203ENST00000396858 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
GAPDH-203ENST00000396858 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
GAPDH-203ENST00000396858 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
GAPDH-203ENST00000396858 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
GAPDH-203ENST00000396858 MT1AP04731 61 aa4.3□□□□□ -1.72
GAPDH-203ENST00000396858 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
GAPDH-203ENST00000396858 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
GAPDH-203ENST00000396858 MT4P47944 62 aa4.25□□□□□ -1.73
GAPDH-203ENST00000396858 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
GAPDH-203ENST00000396858 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
GAPDH-203ENST00000396858 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
GAPDH-203ENST00000396858 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
GAPDH-203ENST00000396858 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
GAPDH-203ENST00000396858 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
GAPDH-203ENST00000396858 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
GAPDH-203ENST00000396858 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
GAPDH-203ENST00000396858 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
GAPDH-203ENST00000396858 MT3P25713 68 aa3.92□□□□□ -1.78
GAPDH-203ENST00000396858 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.79
GAPDH-203ENST00000396858 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
GAPDH-203ENST00000396858 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
GAPDH-203ENST00000396858 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
GAPDH-203ENST00000396858 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
GAPDH-203ENST00000396858 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
GAPDH-203ENST00000396858 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
GAPDH-203ENST00000396858 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
GAPDH-203ENST00000396858 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
GAPDH-203ENST00000396858 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
GAPDH-203ENST00000396858 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
GAPDH-203ENST00000396858 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
GAPDH-203ENST00000396858 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
GAPDH-203ENST00000396858 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
GAPDH-203ENST00000396858 INE1O15225 51 aa3.27□□□□□ -1.89
GAPDH-203ENST00000396858 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
GAPDH-203ENST00000396858 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
GAPDH-203ENST00000396858 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
GAPDH-203ENST00000396858 PRM1P04553 51 aa2.94□□□□□ -1.94
GAPDH-203ENST00000396858 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
GAPDH-203ENST00000396858 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
GAPDH-203ENST00000396858 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
GAPDH-203ENST00000396858 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
GAPDH-203ENST00000396858 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms