RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
GAPDH-202ENST00000396856 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
GAPDH-202ENST00000396856 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
GAPDH-202ENST00000396856 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
GAPDH-202ENST00000396856 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
GAPDH-202ENST00000396856 A6NED7 52 aa4.79□□□□□ -1.64
GAPDH-202ENST00000396856 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
GAPDH-202ENST00000396856 A8MU10 97 aa4.74□□□□□ -1.65
GAPDH-202ENST00000396856 KRTAP12-1P59990 96 aa4.73□□□□□ -1.65
GAPDH-202ENST00000396856 PMAIP1Q13794 54 aa4.73□□□□□ -1.65
GAPDH-202ENST00000396856 A0A0D9SG42 100 aa4.72□□□□□ -1.65
GAPDH-202ENST00000396856 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
GAPDH-202ENST00000396856 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
GAPDH-202ENST00000396856 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
GAPDH-202ENST00000396856 K7ERS5 55 aa4.61□□□□□ -1.67
GAPDH-202ENST00000396856 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
GAPDH-202ENST00000396856 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
GAPDH-202ENST00000396856 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
GAPDH-202ENST00000396856 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
GAPDH-202ENST00000396856 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
GAPDH-202ENST00000396856 MT1EP04732 61 aa4.49□□□□□ -1.69
GAPDH-202ENST00000396856 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
GAPDH-202ENST00000396856 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
GAPDH-202ENST00000396856 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
GAPDH-202ENST00000396856 MT4P47944 62 aa4.44□□□□□ -1.7
GAPDH-202ENST00000396856 ROMO1P60602 79 aa4.41□□□□□ -1.7
GAPDH-202ENST00000396856 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
GAPDH-202ENST00000396856 MT1GP13640 62 aa4.38□□□□□ -1.71
GAPDH-202ENST00000396856 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
GAPDH-202ENST00000396856 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
GAPDH-202ENST00000396856 TNP1P09430 55 aa4.36□□□□□ -1.71
GAPDH-202ENST00000396856 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
GAPDH-202ENST00000396856 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
GAPDH-202ENST00000396856 MT1LQ93083 61 aa4.29□□□□□ -1.72
GAPDH-202ENST00000396856 MT1MQ8N339 61 aa4.28□□□□□ -1.72
GAPDH-202ENST00000396856 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
GAPDH-202ENST00000396856 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
GAPDH-202ENST00000396856 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
GAPDH-202ENST00000396856 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
GAPDH-202ENST00000396856 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
GAPDH-202ENST00000396856 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
GAPDH-202ENST00000396856 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
GAPDH-202ENST00000396856 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
GAPDH-202ENST00000396856 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
GAPDH-202ENST00000396856 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
GAPDH-202ENST00000396856 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
GAPDH-202ENST00000396856 AHNAKQ09666 5890 aaKnown RBP3.86□□□□□ -1.79
GAPDH-202ENST00000396856 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
GAPDH-202ENST00000396856 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
GAPDH-202ENST00000396856 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
GAPDH-202ENST00000396856 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
GAPDH-202ENST00000396856 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
GAPDH-202ENST00000396856 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
GAPDH-202ENST00000396856 MT1AP04731 61 aa3.65□□□□□ -1.83
GAPDH-202ENST00000396856 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
GAPDH-202ENST00000396856 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
GAPDH-202ENST00000396856 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
GAPDH-202ENST00000396856 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
GAPDH-202ENST00000396856 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
GAPDH-202ENST00000396856 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
GAPDH-202ENST00000396856 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
GAPDH-202ENST00000396856 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
GAPDH-202ENST00000396856 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
GAPDH-202ENST00000396856 MT3P25713 68 aa3.36□□□□□ -1.87
GAPDH-202ENST00000396856 INE1O15225 51 aa3.12□□□□□ -1.91
GAPDH-202ENST00000396856 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
GAPDH-202ENST00000396856 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
GAPDH-202ENST00000396856 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
GAPDH-202ENST00000396856 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
GAPDH-202ENST00000396856 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
GAPDH-202ENST00000396856 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
GAPDH-202ENST00000396856 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
GAPDH-202ENST00000396856 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
GAPDH-202ENST00000396856 PRM1P04553 51 aa2.25□□□□□ -2.05
GAPDH-202ENST00000396856 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
GAPDH-202ENST00000396856 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
GAPDH-202ENST00000396856 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms