RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 A0A1B0GU33 70 aa4.54□□□□□ -1.68
NDUFA9-202ENST00000396655 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
NDUFA9-202ENST00000396655 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
NDUFA9-202ENST00000396655 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
NDUFA9-202ENST00000396655 A8MU10 97 aa4.5□□□□□ -1.69
NDUFA9-202ENST00000396655 SPRR2EP22531 72 aa4.5□□□□□ -1.69
NDUFA9-202ENST00000396655 SPRR2BP35325 72 aa4.5□□□□□ -1.69
NDUFA9-202ENST00000396655 SPRR2AP35326 72 aa4.5□□□□□ -1.69
NDUFA9-202ENST00000396655 COA5Q86WW8 74 aa4.49□□□□□ -1.69
NDUFA9-202ENST00000396655 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
NDUFA9-202ENST00000396655 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
NDUFA9-202ENST00000396655 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
NDUFA9-202ENST00000396655 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
NDUFA9-202ENST00000396655 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
NDUFA9-202ENST00000396655 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
NDUFA9-202ENST00000396655 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
NDUFA9-202ENST00000396655 SPRR2DP22532 72 aa4.35□□□□□ -1.71
NDUFA9-202ENST00000396655 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
NDUFA9-202ENST00000396655 SPATA8Q6RVD6 105 aa4.29□□□□□ -1.72
NDUFA9-202ENST00000396655 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
NDUFA9-202ENST00000396655 A0A0D9SG42 100 aa4.28□□□□□ -1.72
NDUFA9-202ENST00000396655 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
NDUFA9-202ENST00000396655 A0A1B0GU69 56 aa4.27□□□□□ -1.73
NDUFA9-202ENST00000396655 UQCR11O14957 56 aa4.24□□□□□ -1.73
NDUFA9-202ENST00000396655 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
NDUFA9-202ENST00000396655 KRTAP19-7Q3SYF9 63 aa4.16□□□□□ -1.74
NDUFA9-202ENST00000396655 MT1EP04732 61 aa4.12□□□□□ -1.75
NDUFA9-202ENST00000396655 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
NDUFA9-202ENST00000396655 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
NDUFA9-202ENST00000396655 MT3P25713 68 aa4.09□□□□□ -1.75
NDUFA9-202ENST00000396655 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
NDUFA9-202ENST00000396655 TNP1P09430 55 aa4.06□□□□□ -1.76
NDUFA9-202ENST00000396655 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
NDUFA9-202ENST00000396655 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
NDUFA9-202ENST00000396655 MT1GP13640 62 aa4.04□□□□□ -1.76
NDUFA9-202ENST00000396655 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
NDUFA9-202ENST00000396655 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
NDUFA9-202ENST00000396655 LCE3AQ5TA76 89 aa3.97□□□□□ -1.77
NDUFA9-202ENST00000396655 INE1O15225 51 aa3.95□□□□□ -1.78
NDUFA9-202ENST00000396655 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
NDUFA9-202ENST00000396655 MT1LQ93083 61 aa3.95□□□□□ -1.78
NDUFA9-202ENST00000396655 MT1MQ8N339 61 aa3.92□□□□□ -1.78
NDUFA9-202ENST00000396655 MT4P47944 62 aa3.88□□□□□ -1.79
NDUFA9-202ENST00000396655 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
NDUFA9-202ENST00000396655 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
NDUFA9-202ENST00000396655 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
NDUFA9-202ENST00000396655 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
NDUFA9-202ENST00000396655 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
NDUFA9-202ENST00000396655 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
NDUFA9-202ENST00000396655 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
NDUFA9-202ENST00000396655 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
NDUFA9-202ENST00000396655 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
NDUFA9-202ENST00000396655 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
NDUFA9-202ENST00000396655 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
NDUFA9-202ENST00000396655 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
NDUFA9-202ENST00000396655 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
NDUFA9-202ENST00000396655 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
NDUFA9-202ENST00000396655 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
NDUFA9-202ENST00000396655 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
NDUFA9-202ENST00000396655 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
NDUFA9-202ENST00000396655 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
NDUFA9-202ENST00000396655 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
NDUFA9-202ENST00000396655 MT1AP04731 61 aa3.37□□□□□ -1.87
NDUFA9-202ENST00000396655 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
NDUFA9-202ENST00000396655 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
NDUFA9-202ENST00000396655 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
NDUFA9-202ENST00000396655 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
NDUFA9-202ENST00000396655 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
NDUFA9-202ENST00000396655 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
NDUFA9-202ENST00000396655 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
NDUFA9-202ENST00000396655 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
NDUFA9-202ENST00000396655 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
NDUFA9-202ENST00000396655 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
NDUFA9-202ENST00000396655 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
NDUFA9-202ENST00000396655 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
NDUFA9-202ENST00000396655 PRM1P04553 51 aa1.91□□□□□ -2.1
NDUFA9-202ENST00000396655 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
NDUFA9-202ENST00000396655 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 173.4 ms