RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 VCANP13611 3396 aa-6.38□□□□□ -3.43
RNU6-239P-201ENST00000390990 H0YGX0 51 aa-6.4□□□□□ -3.43
RNU6-239P-201ENST00000390990 TFF3Q07654 80 aa-6.4□□□□□ -3.43
RNU6-239P-201ENST00000390990 DEFB133Q30KQ1 61 aa-6.4□□□□□ -3.43
RNU6-239P-201ENST00000390990 BRCA2P51587 3418 aa-6.42□□□□□ -3.44
RNU6-239P-201ENST00000390990 DUOX2Q9NRD8 1548 aa-6.42□□□□□ -3.44
RNU6-239P-201ENST00000390990 UGGT1Q9NYU2 1555 aa-6.43□□□□□ -3.44
RNU6-239P-201ENST00000390990 SMIM2Q9BVW6 85 aa-6.45□□□□□ -3.44
RNU6-239P-201ENST00000390990 CDH23Q9H251 3354 aa-6.45□□□□□ -3.44
RNU6-239P-201ENST00000390990 AGLP35573 1532 aa-6.49□□□□□ -3.45
RNU6-239P-201ENST00000390990 PEG3Q9GZU2 1588 aa-6.51□□□□□ -3.45
RNU6-239P-201ENST00000390990 IQGAP3Q86VI3 1631 aa-6.54□□□□□ -3.46
RNU6-239P-201ENST00000390990 RHPN1-AS1Q9BWJ2 59 aa-6.55□□□□□ -3.46
RNU6-239P-201ENST00000390990 DDX60Q8IY21 1712 aaKnown RBP-6.61□□□□□ -3.47
RNU6-239P-201ENST00000390990 CD52P31358 61 aa-6.62□□□□□ -3.47
RNU6-239P-201ENST00000390990 CLTCL1P53675 1640 aa-6.65□□□□□ -3.47
RNU6-239P-201ENST00000390990 RB1CC1Q8TDY2 1594 aa-6.65□□□□□ -3.47
RNU6-239P-201ENST00000390990 HTN1P15515 57 aa-6.65□□□□□ -3.47
RNU6-239P-201ENST00000390990 VPS13AQ96RL7 3174 aa-6.66□□□□□ -3.48
RNU6-239P-201ENST00000390990 TRPM2O94759 1503 aa-6.7□□□□□ -3.48
RNU6-239P-201ENST00000390990 PLNP26678 52 aa-6.71□□□□□ -3.48
RNU6-239P-201ENST00000390990 UGGT2Q9NYU1 1516 aa-6.71□□□□□ -3.48
RNU6-239P-201ENST00000390990 CCDC18Q5T9S5 1454 aa-6.73□□□□□ -3.49
RNU6-239P-201ENST00000390990 A0A096LNI7 61 aa-6.74□□□□□ -3.49
RNU6-239P-201ENST00000390990 LINC01590Q5TEZ4 76 aa-6.75□□□□□ -3.49
RNU6-239P-201ENST00000390990 ABCA5Q8WWZ7 1642 aa-6.77□□□□□ -3.49
RNU6-239P-201ENST00000390990 CPS1P31327 1500 aa-6.78□□□□□ -3.49
RNU6-239P-201ENST00000390990 TOMM7Q9P0U1 55 aa-6.8□□□□□ -3.5
RNU6-239P-201ENST00000390990 PRXQ9BXM0 1461 aa-6.85□□□□□ -3.51
RNU6-239P-201ENST00000390990 NFAT5O94916 1531 aa-6.86□□□□□ -3.51
RNU6-239P-201ENST00000390990 IQGAP1P46940 1657 aa-6.89□□□□□ -3.51
RNU6-239P-201ENST00000390990 GNG2P59768 71 aa-6.89□□□□□ -3.51
RNU6-239P-201ENST00000390990 ADCY10Q96PN6 1610 aa-6.94□□□□□ -3.52
RNU6-239P-201ENST00000390990 ABCA10Q8WWZ4 1543 aa-6.99□□□□□ -3.53
RNU6-239P-201ENST00000390990 NDUFA1O15239 70 aa-7.01□□□□□ -3.53
RNU6-239P-201ENST00000390990 DEFB124Q8NES8 71 aa-7.01□□□□□ -3.53
RNU6-239P-201ENST00000390990 PDCD5O14737 125 aa-7.02□□□□□ -3.53
RNU6-239P-201ENST00000390990 SMCO4Q9NRQ5 59 aa-7.07□□□□□ -3.54
RNU6-239P-201ENST00000390990 EFCAB5A4FU69 1503 aa-7.07□□□□□ -3.54
RNU6-239P-201ENST00000390990 DUOX1Q9NRD9 1551 aa-7.21□□□□□ -3.56
RNU6-239P-201ENST00000390990 UTRNP46939 3433 aa-7.24□□□□□ -3.57
RNU6-239P-201ENST00000390990 FANCD2Q9BXW9 1451 aa-7.28□□□□□ -3.57
RNU6-239P-201ENST00000390990 ABCC8Q09428 1581 aa-7.29□□□□□ -3.58
RNU6-239P-201ENST00000390990 A0A087WWC5 75 aa-7.3□□□□□ -3.58
RNU6-239P-201ENST00000390990 LINC01556Q5JQF7 62 aa-7.35□□□□□ -3.59
RNU6-239P-201ENST00000390990 ERICH3Q5RHP9 1530 aa-7.36□□□□□ -3.59
RNU6-239P-201ENST00000390990 CMC2Q9NRP2 79 aa-7.4□□□□□ -3.59
RNU6-239P-201ENST00000390990 TOP2AP11388 1531 aaKnown RBP-7.43□□□□□ -3.6
RNU6-239P-201ENST00000390990 SMIM5Q71RC9 77 aa-7.45□□□□□ -3.6
RNU6-239P-201ENST00000390990 RPL39P62891 51 aaKnown RBP-7.51□□□□□ -3.61
RNU6-239P-201ENST00000390990 SAMD9LQ8IVG5 1584 aa-7.52□□□□□ -3.61
RNU6-239P-201ENST00000390990 ATP7AQ04656 1500 aa-7.7□□□□□ -3.64
RNU6-239P-201ENST00000390990 DEFB104AQ8WTQ1 72 aa-7.74□□□□□ -3.65
RNU6-239P-201ENST00000390990 RPL39LQ96EH5 51 aaKnown RBP-7.74□□□□□ -3.65
RNU6-239P-201ENST00000390990 H3BUX3 64 aa-7.79□□□□□ -3.66
RNU6-239P-201ENST00000390990 MROH2BQ7Z745 1585 aa-7.84□□□□□ -3.67
RNU6-239P-201ENST00000390990 GOLGB1Q14789 3259 aaKnown RBP-8.04□□□□□ -3.7
RNU6-239P-201ENST00000390990 APELAP0DMC3 54 aa-8.09□□□□□ -3.7
RNU6-239P-201ENST00000390990 A0A096LPF7 62 aa-8.19□□□□□ -3.72
RNU6-239P-201ENST00000390990 K7EIM0 57 aa-8.38□□□□□ -3.75
RNU6-239P-201ENST00000390990 SNRPGP15A8MWD9 76 aa-8.48□□□□□ -3.77
RNU6-239P-201ENST00000390990 IQGAP2Q13576 1575 aa-8.48□□□□□ -3.77
RNU6-239P-201ENST00000390990 HTN3P15516 51 aa-8.49□□□□□ -3.77
RNU6-239P-201ENST00000390990 PRCDQ00LT1 54 aa-8.57□□□□□ -3.78
RNU6-239P-201ENST00000390990 ARHGAP5-AS1Q96IT6 56 aa-8.64□□□□□ -3.79
RNU6-239P-201ENST00000390990 SMIM31A0A1B0GVY4 71 aa-8.68□□□□□ -3.8
RNU6-239P-201ENST00000390990 TMEM167AQ8TBQ9 72 aa-8.68□□□□□ -3.8
RNU6-239P-201ENST00000390990 TOMM5Q8N4H5 51 aa-8.81□□□□□ -3.82
RNU6-239P-201ENST00000390990 Q9Y3F1 56 aa-9.09□□□□□ -3.86
RNU6-239P-201ENST00000390990 H3BSH0 61 aa-9.15□□□□□ -3.87
RNU6-239P-201ENST00000390990 SNRPGP62308 76 aaKnown RBP-9.35□□□□□ -3.91
RNU6-239P-201ENST00000390990 RPL39P5Q59GN2 51 aa-9.35□□□□□ -3.91
RNU6-239P-201ENST00000390990 GCC2Q8IWJ2 1684 aa-9.45□□□□□ -3.92
RNU6-239P-201ENST00000390990 DEFB108AA8MXU0 73 aa-9.47□□□□□ -3.93
RNU6-239P-201ENST00000390990 COX14Q96I36 57 aa-9.54□□□□□ -3.94
RNU6-239P-201ENST00000390990 DEFB108BQ8NET1 73 aa-9.98□□□□□ -4.01
RNU6-239P-201ENST00000390990 STATHP02808 62 aa-10.62□□□□□ -4.11
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms