RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 TFF3Q07654 80 aa-1.95□□□□□ -2.72
SNORD28-201ENST00000384706 LOC400499M0QZD8 3231 aa-1.96□□□□□ -2.72
SNORD28-201ENST00000384706 DEFB133Q30KQ1 61 aa-1.96□□□□□ -2.72
SNORD28-201ENST00000384706 SMIM2Q9BVW6 85 aa-1.96□□□□□ -2.72
SNORD28-201ENST00000384706 AGLP35573 1532 aa-1.96□□□□□ -2.72
SNORD28-201ENST00000384706 IQGAP3Q86VI3 1631 aa-1.97□□□□□ -2.72
SNORD28-201ENST00000384706 CENPFP49454 3210 aa-1.98□□□□□ -2.73
SNORD28-201ENST00000384706 KRTAP19-2Q3LHN2 52 aa-1.99□□□□□ -2.73
SNORD28-201ENST00000384706 ASPMQ8IZT6 3477 aa-2□□□□□ -2.73
SNORD28-201ENST00000384706 RHPN1-AS1Q9BWJ2 59 aa-2□□□□□ -2.73
SNORD28-201ENST00000384706 CCDC18Q5T9S5 1454 aa-2.01□□□□□ -2.73
SNORD28-201ENST00000384706 DDX60Q8IY21 1712 aaKnown RBP-2.01□□□□□ -2.73
SNORD28-201ENST00000384706 VCANP13611 3396 aa-2.01□□□□□ -2.73
SNORD28-201ENST00000384706 RB1CC1Q8TDY2 1594 aa-2.02□□□□□ -2.73
SNORD28-201ENST00000384706 CLTCL1P53675 1640 aa-2.02□□□□□ -2.73
SNORD28-201ENST00000384706 HTN1P15515 57 aa-2.02□□□□□ -2.73
SNORD28-201ENST00000384706 CD52P31358 61 aa-2.02□□□□□ -2.73
SNORD28-201ENST00000384706 PLNP26678 52 aa-2.03□□□□□ -2.73
SNORD28-201ENST00000384706 UGGT2Q9NYU1 1516 aa-2.03□□□□□ -2.73
SNORD28-201ENST00000384706 BRCA2P51587 3418 aa-2.05□□□□□ -2.74
SNORD28-201ENST00000384706 TRPM2O94759 1503 aa-2.05□□□□□ -2.74
SNORD28-201ENST00000384706 CPS1P31327 1500 aa-2.05□□□□□ -2.74
SNORD28-201ENST00000384706 A0A096LNI7 61 aa-2.06□□□□□ -2.74
SNORD28-201ENST00000384706 CDH23Q9H251 3354 aa-2.06□□□□□ -2.74
SNORD28-201ENST00000384706 ABCA5Q8WWZ7 1642 aa-2.06□□□□□ -2.74
SNORD28-201ENST00000384706 GNG2P59768 71 aa-2.07□□□□□ -2.74
SNORD28-201ENST00000384706 LINC01590Q5TEZ4 76 aa-2.07□□□□□ -2.74
SNORD28-201ENST00000384706 TOMM7Q9P0U1 55 aa-2.07□□□□□ -2.74
SNORD28-201ENST00000384706 IQGAP1P46940 1657 aa-2.09□□□□□ -2.74
SNORD28-201ENST00000384706 NFAT5O94916 1531 aa-2.11□□□□□ -2.75
SNORD28-201ENST00000384706 PRXQ9BXM0 1461 aa-2.11□□□□□ -2.75
SNORD28-201ENST00000384706 ABCA10Q8WWZ4 1543 aa-2.12□□□□□ -2.75
SNORD28-201ENST00000384706 ADCY10Q96PN6 1610 aa-2.12□□□□□ -2.75
SNORD28-201ENST00000384706 PDCD5O14737 125 aa-2.12□□□□□ -2.75
SNORD28-201ENST00000384706 NDUFA1O15239 70 aa-2.14□□□□□ -2.75
SNORD28-201ENST00000384706 SMCO4Q9NRQ5 59 aa-2.14□□□□□ -2.75
SNORD28-201ENST00000384706 EFCAB5A4FU69 1503 aa-2.14□□□□□ -2.75
SNORD28-201ENST00000384706 VPS13AQ96RL7 3174 aa-2.15□□□□□ -2.75
SNORD28-201ENST00000384706 DEFB124Q8NES8 71 aa-2.17□□□□□ -2.76
SNORD28-201ENST00000384706 ABCC8Q09428 1581 aa-2.22□□□□□ -2.76
SNORD28-201ENST00000384706 DUOX1Q9NRD9 1551 aa-2.22□□□□□ -2.76
SNORD28-201ENST00000384706 A0A087WWC5 75 aa-2.22□□□□□ -2.76
SNORD28-201ENST00000384706 FANCD2Q9BXW9 1451 aa-2.22□□□□□ -2.77
SNORD28-201ENST00000384706 ERICH3Q5RHP9 1530 aa-2.23□□□□□ -2.77
SNORD28-201ENST00000384706 SMIM5Q71RC9 77 aa-2.25□□□□□ -2.77
SNORD28-201ENST00000384706 CMC2Q9NRP2 79 aa-2.25□□□□□ -2.77
SNORD28-201ENST00000384706 LINC01556Q5JQF7 62 aa-2.27□□□□□ -2.77
SNORD28-201ENST00000384706 TOP2AP11388 1531 aaKnown RBP-2.28□□□□□ -2.77
SNORD28-201ENST00000384706 RPL39P62891 51 aaKnown RBP-2.31□□□□□ -2.78
SNORD28-201ENST00000384706 SAMD9LQ8IVG5 1584 aa-2.32□□□□□ -2.78
SNORD28-201ENST00000384706 UTRNP46939 3433 aa-2.33□□□□□ -2.78
SNORD28-201ENST00000384706 ATP7AQ04656 1500 aa-2.36□□□□□ -2.79
SNORD28-201ENST00000384706 DEFB104AQ8WTQ1 72 aa-2.38□□□□□ -2.79
SNORD28-201ENST00000384706 RPL39LQ96EH5 51 aaKnown RBP-2.38□□□□□ -2.79
SNORD28-201ENST00000384706 MROH2BQ7Z745 1585 aa-2.4□□□□□ -2.79
SNORD28-201ENST00000384706 H3BUX3 64 aa-2.41□□□□□ -2.8
SNORD28-201ENST00000384706 APELAP0DMC3 54 aa-2.5□□□□□ -2.81
SNORD28-201ENST00000384706 A0A096LPF7 62 aa-2.53□□□□□ -2.81
SNORD28-201ENST00000384706 SNRPGP15A8MWD9 76 aa-2.6□□□□□ -2.83
SNORD28-201ENST00000384706 GOLGB1Q14789 3259 aaKnown RBP-2.6□□□□□ -2.83
SNORD28-201ENST00000384706 IQGAP2Q13576 1575 aa-2.61□□□□□ -2.83
SNORD28-201ENST00000384706 K7EIM0 57 aa-2.61□□□□□ -2.83
SNORD28-201ENST00000384706 HTN3P15516 51 aa-2.62□□□□□ -2.83
SNORD28-201ENST00000384706 SMIM31A0A1B0GVY4 71 aa-2.64□□□□□ -2.83
SNORD28-201ENST00000384706 PRCDQ00LT1 54 aa-2.64□□□□□ -2.83
SNORD28-201ENST00000384706 ARHGAP5-AS1Q96IT6 56 aa-2.67□□□□□ -2.84
SNORD28-201ENST00000384706 TMEM167AQ8TBQ9 72 aa-2.68□□□□□ -2.84
SNORD28-201ENST00000384706 TOMM5Q8N4H5 51 aa-2.69□□□□□ -2.84
SNORD28-201ENST00000384706 Q9Y3F1 56 aa-2.82□□□□□ -2.86
SNORD28-201ENST00000384706 H3BSH0 61 aa-2.84□□□□□ -2.86
SNORD28-201ENST00000384706 SNRPGP62308 76 aaKnown RBP-2.89□□□□□ -2.87
SNORD28-201ENST00000384706 RPL39P5Q59GN2 51 aa-2.9□□□□□ -2.87
SNORD28-201ENST00000384706 GCC2Q8IWJ2 1684 aa-2.91□□□□□ -2.87
SNORD28-201ENST00000384706 DEFB108AA8MXU0 73 aa-2.93□□□□□ -2.88
SNORD28-201ENST00000384706 COX14Q96I36 57 aa-2.97□□□□□ -2.88
SNORD28-201ENST00000384706 DEFB108BQ8NET1 73 aa-3.1□□□□□ -2.91
SNORD28-201ENST00000384706 STATHP02808 62 aa-3.32□□□□□ -2.94
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms