RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
RPAIN-202ENST00000381208 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
RPAIN-202ENST00000381208 KRTAP12-2P59991 146 aa5.41□□□□□ -1.54
RPAIN-202ENST00000381208 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
RPAIN-202ENST00000381208 M0QZ58 72 aa5.4□□□□□ -1.55
RPAIN-202ENST00000381208 P0C880 135 aa5.4□□□□□ -1.55
RPAIN-202ENST00000381208 SPATA8Q6RVD6 105 aa5.38□□□□□ -1.55
RPAIN-202ENST00000381208 KRTAP8-1Q8IUC2 63 aa5.38□□□□□ -1.55
RPAIN-202ENST00000381208 SPRR2EP22531 72 aa5.37□□□□□ -1.55
RPAIN-202ENST00000381208 SPRR2BP35325 72 aa5.37□□□□□ -1.55
RPAIN-202ENST00000381208 SPRR2AP35326 72 aa5.37□□□□□ -1.55
RPAIN-202ENST00000381208 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
RPAIN-202ENST00000381208 A0A1B0GU33 70 aa5.33□□□□□ -1.56
RPAIN-202ENST00000381208 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
RPAIN-202ENST00000381208 A8MU10 97 aa5.32□□□□□ -1.56
RPAIN-202ENST00000381208 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
RPAIN-202ENST00000381208 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
RPAIN-202ENST00000381208 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
RPAIN-202ENST00000381208 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
RPAIN-202ENST00000381208 SPRR2DP22532 72 aa5.19□□□□□ -1.58
RPAIN-202ENST00000381208 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
RPAIN-202ENST00000381208 KRTAP4-4Q9BYR3 166 aa5.12□□□□□ -1.59
RPAIN-202ENST00000381208 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
RPAIN-202ENST00000381208 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
RPAIN-202ENST00000381208 KRTAP25-1Q3LHN0 102 aa5.05□□□□□ -1.6
RPAIN-202ENST00000381208 A0A0D9SG42 100 aa5.04□□□□□ -1.6
RPAIN-202ENST00000381208 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
RPAIN-202ENST00000381208 SPINT4Q6UDR6 99 aa4.93□□□□□ -1.62
RPAIN-202ENST00000381208 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
RPAIN-202ENST00000381208 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
RPAIN-202ENST00000381208 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
RPAIN-202ENST00000381208 MT1EP04732 61 aa4.84□□□□□ -1.63
RPAIN-202ENST00000381208 MT3P25713 68 aa4.79□□□□□ -1.64
RPAIN-202ENST00000381208 MT1GP13640 62 aa4.75□□□□□ -1.65
RPAIN-202ENST00000381208 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
RPAIN-202ENST00000381208 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
RPAIN-202ENST00000381208 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
RPAIN-202ENST00000381208 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
RPAIN-202ENST00000381208 MT1MQ8N339 61 aa4.62□□□□□ -1.67
RPAIN-202ENST00000381208 TNP1P09430 55 aa4.61□□□□□ -1.67
RPAIN-202ENST00000381208 MT1LQ93083 61 aa4.61□□□□□ -1.67
RPAIN-202ENST00000381208 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
RPAIN-202ENST00000381208 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
RPAIN-202ENST00000381208 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
RPAIN-202ENST00000381208 MT4P47944 62 aa4.52□□□□□ -1.69
RPAIN-202ENST00000381208 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
RPAIN-202ENST00000381208 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
RPAIN-202ENST00000381208 INE1O15225 51 aa4.41□□□□□ -1.7
RPAIN-202ENST00000381208 KRTAP12-3P60328 96 aa4.41□□□□□ -1.7
RPAIN-202ENST00000381208 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
RPAIN-202ENST00000381208 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
RPAIN-202ENST00000381208 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
RPAIN-202ENST00000381208 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
RPAIN-202ENST00000381208 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
RPAIN-202ENST00000381208 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
RPAIN-202ENST00000381208 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
RPAIN-202ENST00000381208 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
RPAIN-202ENST00000381208 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
RPAIN-202ENST00000381208 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
RPAIN-202ENST00000381208 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
RPAIN-202ENST00000381208 MT1AP04731 61 aa3.93□□□□□ -1.78
RPAIN-202ENST00000381208 KRTAP6-1Q3LI64 71 aa3.88□□□□□ -1.79
RPAIN-202ENST00000381208 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
RPAIN-202ENST00000381208 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
RPAIN-202ENST00000381208 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
RPAIN-202ENST00000381208 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
RPAIN-202ENST00000381208 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
RPAIN-202ENST00000381208 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
RPAIN-202ENST00000381208 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
RPAIN-202ENST00000381208 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
RPAIN-202ENST00000381208 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
RPAIN-202ENST00000381208 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
RPAIN-202ENST00000381208 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
RPAIN-202ENST00000381208 PRM1P04553 51 aa2.55□□□□□ -2
RPAIN-202ENST00000381208 PHGR1C9JFL3 82 aa2.54□□□□□ -2
RPAIN-202ENST00000381208 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
RPAIN-202ENST00000381208 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 219.5 ms