RNA–Protein interactions for RNA: ENST00000370115.1

VCAM1-203, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene VCAM1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-203ENST00000370115 KRTAP19-4Q3LI73 84 aa2.14□□□□□ -2.07
VCAM1-203ENST00000370115 KRTAP2-3P0C7H8 128 aa2.13□□□□□ -2.07
VCAM1-203ENST00000370115 KRTAP2-4Q9BYR9 128 aa2.13□□□□□ -2.07
VCAM1-203ENST00000370115 TNP1P09430 55 aa2.12□□□□□ -2.07
VCAM1-203ENST00000370115 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
VCAM1-203ENST00000370115 SPRR2GQ9BYE4 73 aa2.11□□□□□ -2.07
VCAM1-203ENST00000370115 PRO2289Q9P1D8 64 aa2.11□□□□□ -2.07
VCAM1-203ENST00000370115 FCGBPQ9Y6R7 5405 aaPredicted RBP2.11□□□□□ -2.07
VCAM1-203ENST00000370115 MT1HP80294 61 aa2.09□□□□□ -2.07
VCAM1-203ENST00000370115 M0R2T5 61 aa2.09□□□□□ -2.08
VCAM1-203ENST00000370115 MT1FP04733 61 aa2.06□□□□□ -2.08
VCAM1-203ENST00000370115 MT2AP02795 61 aa2.06□□□□□ -2.08
VCAM1-203ENST00000370115 KRTAP10-10P60014 251 aa2.05□□□□□ -2.08
VCAM1-203ENST00000370115 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
VCAM1-203ENST00000370115 LCE3AQ5TA76 89 aa2.02□□□□□ -2.09
VCAM1-203ENST00000370115 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
VCAM1-203ENST00000370115 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
VCAM1-203ENST00000370115 INE1O15225 51 aa2.01□□□□□ -2.09
VCAM1-203ENST00000370115 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
VCAM1-203ENST00000370115 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
VCAM1-203ENST00000370115 KRTAP2-2Q9BYT5 123 aa2□□□□□ -2.09
VCAM1-203ENST00000370115 KRTAP2-1Q9BYU5 128 aa2□□□□□ -2.09
VCAM1-203ENST00000370115 MT1BP07438 61 aa1.99□□□□□ -2.09
VCAM1-203ENST00000370115 KRTAP10-5P60370 271 aa1.99□□□□□ -2.09
VCAM1-203ENST00000370115 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
VCAM1-203ENST00000370115 MT1XP80297 61 aa1.98□□□□□ -2.09
VCAM1-203ENST00000370115 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
VCAM1-203ENST00000370115 KMT2DO14686 5537 aa1.97□□□□□ -2.09
VCAM1-203ENST00000370115 KRTAP8-1Q8IUC2 63 aa1.96□□□□□ -2.1
VCAM1-203ENST00000370115 MUC12Q9UKN1 5478 aa1.94□□□□□ -2.1
VCAM1-203ENST00000370115 KRTAP10-7P60409 375 aaPredicted RBP1.93□□□□□ -2.1
VCAM1-203ENST00000370115 KRTAP10-12P60413 245 aa1.93□□□□□ -2.1
VCAM1-203ENST00000370115 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
VCAM1-203ENST00000370115 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
VCAM1-203ENST00000370115 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
VCAM1-203ENST00000370115 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
VCAM1-203ENST00000370115 KRTAP4-3Q9BYR4 195 aa1.88□□□□□ -2.11
VCAM1-203ENST00000370115 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
VCAM1-203ENST00000370115 MDN1Q9NU22 5596 aa1.83□□□□□ -2.12
VCAM1-203ENST00000370115 LCE3CQ5T5A8 94 aa1.81□□□□□ -2.12
VCAM1-203ENST00000370115 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
VCAM1-203ENST00000370115 KRTAP19-7Q3SYF9 63 aa1.77□□□□□ -2.13
VCAM1-203ENST00000370115 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
VCAM1-203ENST00000370115 SPRR2EP22531 72 aa1.74□□□□□ -2.13
VCAM1-203ENST00000370115 SPRR2BP35325 72 aa1.74□□□□□ -2.13
VCAM1-203ENST00000370115 SPRR2AP35326 72 aa1.74□□□□□ -2.13
VCAM1-203ENST00000370115 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
VCAM1-203ENST00000370115 MT1EP04732 61 aa1.71□□□□□ -2.14
VCAM1-203ENST00000370115 MT1LQ93083 61 aa1.71□□□□□ -2.14
VCAM1-203ENST00000370115 SPRR2DP22532 72 aa1.69□□□□□ -2.14
VCAM1-203ENST00000370115 LCE1AQ5T7P2 110 aa1.68□□□□□ -2.14
VCAM1-203ENST00000370115 SPRR2FQ96RM1 72 aa1.67□□□□□ -2.14
VCAM1-203ENST00000370115 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
VCAM1-203ENST00000370115 DSTQ03001 7570 aaKnown RBP1.62□□□□□ -2.15
VCAM1-203ENST00000370115 LCE1EQ5T753 118 aa1.61□□□□□ -2.15
VCAM1-203ENST00000370115 MT1GP13640 62 aa1.6□□□□□ -2.15
VCAM1-203ENST00000370115 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
VCAM1-203ENST00000370115 MT1MQ8N339 61 aa1.6□□□□□ -2.15
VCAM1-203ENST00000370115 OBSCNQ5VST9 7968 aa1.51□□□□□ -2.17
VCAM1-203ENST00000370115 MT4P47944 62 aa1.49□□□□□ -2.17
VCAM1-203ENST00000370115 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
VCAM1-203ENST00000370115 LCE3EQ5T5B0 92 aa1.47□□□□□ -2.17
VCAM1-203ENST00000370115 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
VCAM1-203ENST00000370115 SYNE1Q8NF91 8797 aaKnown RBP1.44□□□□□ -2.18
VCAM1-203ENST00000370115 MT1AP04731 61 aa1.43□□□□□ -2.18
VCAM1-203ENST00000370115 MT3P25713 68 aa1.4□□□□□ -2.19
VCAM1-203ENST00000370115 LCE3DQ9BYE3 92 aa1.39□□□□□ -2.19
VCAM1-203ENST00000370115 KRTAP20-2Q3LI61 65 aa1.32□□□□□ -2.2
VCAM1-203ENST00000370115 PRM1P04553 51 aa1.32□□□□□ -2.2
VCAM1-203ENST00000370115 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
VCAM1-203ENST00000370115 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
VCAM1-203ENST00000370115 MUC19Q7Z5P9 8384 aa1.09□□□□□ -2.23
VCAM1-203ENST00000370115 LCE1BQ5T7P3 118 aa1.04□□□□□ -2.24
VCAM1-203ENST00000370115 LCE1CQ5T751 118 aa0.99□□□□□ -2.25
VCAM1-203ENST00000370115 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
VCAM1-203ENST00000370115 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
VCAM1-203ENST00000370115 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 120.4 ms