RNA–Protein interactions for RNA: ENST00000368640.8

LAMA4-204, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-204ENST00000368640 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
LAMA4-204ENST00000368640 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
LAMA4-204ENST00000368640 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
LAMA4-204ENST00000368640 MT1XP80297 61 aa4.86□□□□□ -1.63
LAMA4-204ENST00000368640 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
LAMA4-204ENST00000368640 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
LAMA4-204ENST00000368640 TNP1P09430 55 aa4.74□□□□□ -1.65
LAMA4-204ENST00000368640 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
LAMA4-204ENST00000368640 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
LAMA4-204ENST00000368640 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
LAMA4-204ENST00000368640 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
LAMA4-204ENST00000368640 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
LAMA4-204ENST00000368640 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
LAMA4-204ENST00000368640 SPRR2EP22531 72 aa4.64□□□□□ -1.67
LAMA4-204ENST00000368640 SPRR2BP35325 72 aa4.64□□□□□ -1.67
LAMA4-204ENST00000368640 SPRR2AP35326 72 aa4.64□□□□□ -1.67
LAMA4-204ENST00000368640 ROMO1P60602 79 aa4.63□□□□□ -1.67
LAMA4-204ENST00000368640 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
LAMA4-204ENST00000368640 SPRR2FQ96RM1 72 aa4.59□□□□□ -1.67
LAMA4-204ENST00000368640 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
LAMA4-204ENST00000368640 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
LAMA4-204ENST00000368640 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
LAMA4-204ENST00000368640 SPRR2DP22532 72 aa4.49□□□□□ -1.69
LAMA4-204ENST00000368640 PP632Q6XCG6 107 aa4.49□□□□□ -1.69
LAMA4-204ENST00000368640 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
LAMA4-204ENST00000368640 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
LAMA4-204ENST00000368640 KRTAP19-5Q3LI72 72 aa4.35□□□□□ -1.71
LAMA4-204ENST00000368640 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
LAMA4-204ENST00000368640 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
LAMA4-204ENST00000368640 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
LAMA4-204ENST00000368640 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
LAMA4-204ENST00000368640 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
LAMA4-204ENST00000368640 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
LAMA4-204ENST00000368640 MT1EP04732 61 aa4.3□□□□□ -1.72
LAMA4-204ENST00000368640 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
LAMA4-204ENST00000368640 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
LAMA4-204ENST00000368640 MT1GP13640 62 aa4.21□□□□□ -1.74
LAMA4-204ENST00000368640 MT1LQ93083 61 aa4.18□□□□□ -1.74
LAMA4-204ENST00000368640 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
LAMA4-204ENST00000368640 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
LAMA4-204ENST00000368640 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
LAMA4-204ENST00000368640 MT1MQ8N339 61 aa4.07□□□□□ -1.76
LAMA4-204ENST00000368640 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
LAMA4-204ENST00000368640 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
LAMA4-204ENST00000368640 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
LAMA4-204ENST00000368640 MT4P47944 62 aa3.98□□□□□ -1.77
LAMA4-204ENST00000368640 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
LAMA4-204ENST00000368640 MT3P25713 68 aa3.89□□□□□ -1.79
LAMA4-204ENST00000368640 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
LAMA4-204ENST00000368640 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
LAMA4-204ENST00000368640 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
LAMA4-204ENST00000368640 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
LAMA4-204ENST00000368640 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
LAMA4-204ENST00000368640 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
LAMA4-204ENST00000368640 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
LAMA4-204ENST00000368640 MT1AP04731 61 aa3.6□□□□□ -1.83
LAMA4-204ENST00000368640 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
LAMA4-204ENST00000368640 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
LAMA4-204ENST00000368640 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
LAMA4-204ENST00000368640 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
LAMA4-204ENST00000368640 MUC5ACP98088 5654 aa3.46□□□□□ -1.85
LAMA4-204ENST00000368640 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
LAMA4-204ENST00000368640 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
LAMA4-204ENST00000368640 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
LAMA4-204ENST00000368640 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
LAMA4-204ENST00000368640 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
LAMA4-204ENST00000368640 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
LAMA4-204ENST00000368640 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
LAMA4-204ENST00000368640 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
LAMA4-204ENST00000368640 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
LAMA4-204ENST00000368640 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
LAMA4-204ENST00000368640 INE1O15225 51 aa2.75□□□□□ -1.97
LAMA4-204ENST00000368640 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
LAMA4-204ENST00000368640 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
LAMA4-204ENST00000368640 PRM1P04553 51 aa2.34□□□□□ -2.03
LAMA4-204ENST00000368640 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
LAMA4-204ENST00000368640 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
LAMA4-204ENST00000368640 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 54.3 ms