RNA–Protein interactions for RNA: ENST00000367425.8

CFHR3-201, Transcript of complement factor H related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR3, Length 1,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-201ENST00000367425 SPRR2DP22532 72 aa0.38□□□□□ -2.35
CFHR3-201ENST00000367425 DNAH2Q9P225 4427 aa0.38□□□□□ -2.35
CFHR3-201ENST00000367425 FAT3Q8TDW7 4589 aa0.38□□□□□ -2.35
CFHR3-201ENST00000367425 APOBP04114 4563 aaKnown RBP0.38□□□□□ -2.35
CFHR3-201ENST00000367425 EYSQ5T1H1 3165 aa0.38□□□□□ -2.35
CFHR3-201ENST00000367425 TRRAPQ9Y4A5 3859 aa0.38□□□□□ -2.35
CFHR3-201ENST00000367425 KIAA1109Q2LD37 5005 aa0.38□□□□□ -2.35
CFHR3-201ENST00000367425 CDH23Q9H251 3354 aa0.37□□□□□ -2.35
CFHR3-201ENST00000367425 STAB2Q8WWQ8 2551 aa0.37□□□□□ -2.35
CFHR3-201ENST00000367425 DNAH10Q8IVF4 4471 aa0.37□□□□□ -2.35
CFHR3-201ENST00000367425 PCLOQ9Y6V0 5065 aa0.37□□□□□ -2.35
CFHR3-201ENST00000367425 FAT1Q14517 4588 aa0.37□□□□□ -2.35
CFHR3-201ENST00000367425 SMR3BP02814 79 aaPredicted RBP0.37□□□□□ -2.35
CFHR3-201ENST00000367425 RPS29P62273 56 aaKnown RBP0.37□□□□□ -2.35
CFHR3-201ENST00000367425 MT1AP04731 61 aa0.36□□□□□ -2.35
CFHR3-201ENST00000367425 HTN3P15516 51 aa0.36□□□□□ -2.35
CFHR3-201ENST00000367425 SPRR2BP35325 72 aa0.36□□□□□ -2.35
CFHR3-201ENST00000367425 DNAH6Q9C0G6 4158 aa0.36□□□□□ -2.35
CFHR3-201ENST00000367425 LPAP08519 4548 aa0.36□□□□□ -2.35
CFHR3-201ENST00000367425 DNAH14Q0VDD8 3507 aa0.35□□□□□ -2.35
CFHR3-201ENST00000367425 DNAH17Q9UFH2 4485 aa0.35□□□□□ -2.35
CFHR3-201ENST00000367425 KRTAP6-2Q3LI66 62 aa0.35□□□□□ -2.35
CFHR3-201ENST00000367425 DNAH7Q8WXX0 4024 aa0.35□□□□□ -2.35
CFHR3-201ENST00000367425 TLN1Q9Y490 2541 aaKnown RBP0.35□□□□□ -2.35
CFHR3-201ENST00000367425 CMYA5Q8N3K9 4069 aa0.35□□□□□ -2.35
CFHR3-201ENST00000367425 PKD1P98161 4303 aa0.35□□□□□ -2.35
CFHR3-201ENST00000367425 DNAH1Q9P2D7 4330 aa0.35□□□□□ -2.35
CFHR3-201ENST00000367425 SPRR2AP35326 72 aa0.35□□□□□ -2.35
CFHR3-201ENST00000367425 BIRC6Q9NR09 4857 aa0.34□□□□□ -2.35
CFHR3-201ENST00000367425 PLECQ15149 4684 aaKnown RBP0.34□□□□□ -2.36
CFHR3-201ENST00000367425 MYO9AB2RTY4 2548 aa0.34□□□□□ -2.36
CFHR3-201ENST00000367425 SSPOA2VEC9 5147 aa0.33□□□□□ -2.36
CFHR3-201ENST00000367425 KRTAP20-1Q3LI63 56 aa0.33□□□□□ -2.36
CFHR3-201ENST00000367425 RYR1P21817 5038 aa0.32□□□□□ -2.36
CFHR3-201ENST00000367425 DYNC1H1Q14204 4646 aaKnown RBP0.32□□□□□ -2.36
CFHR3-201ENST00000367425 KRTAP19-5Q3LI72 72 aa0.32□□□□□ -2.36
CFHR3-201ENST00000367425 HYDINQ4G0P3 5121 aa0.32□□□□□ -2.36
CFHR3-201ENST00000367425 DEFB4AO15263 64 aa0.31□□□□□ -2.36
CFHR3-201ENST00000367425 DNAH5Q8TE73 4624 aa0.31□□□□□ -2.36
CFHR3-201ENST00000367425 RYR3Q15413 4870 aa0.31□□□□□ -2.36
CFHR3-201ENST00000367425 SPRR2EP22531 72 aa0.31□□□□□ -2.36
CFHR3-201ENST00000367425 SPRR2FQ96RM1 72 aa0.31□□□□□ -2.36
CFHR3-201ENST00000367425 MUC2Q02817 5179 aa0.31□□□□□ -2.36
CFHR3-201ENST00000367425 LRP1BQ9NZR2 4599 aa0.3□□□□□ -2.36
CFHR3-201ENST00000367425 PKHD1P08F94 4074 aa0.3□□□□□ -2.36
CFHR3-201ENST00000367425 STARD9Q9P2P6 4700 aa0.3□□□□□ -2.36
CFHR3-201ENST00000367425 HERC1Q15751 4861 aa0.3□□□□□ -2.36
CFHR3-201ENST00000367425 MUC17Q685J3 4493 aa0.29□□□□□ -2.36
CFHR3-201ENST00000367425 RYR2Q92736 4967 aa0.29□□□□□ -2.36
CFHR3-201ENST00000367425 ABCA13Q86UQ4 5058 aa0.28□□□□□ -2.36
CFHR3-201ENST00000367425 EPPK1P58107 5090 aaKnown RBP0.28□□□□□ -2.36
CFHR3-201ENST00000367425 DNHD1Q96M86 4753 aa0.28□□□□□ -2.36
CFHR3-201ENST00000367425 HERC2O95714 4834 aa0.27□□□□□ -2.37
CFHR3-201ENST00000367425 KMT2CQ8NEZ4 4911 aaKnown RBP0.26□□□□□ -2.37
CFHR3-201ENST00000367425 MT1EP04732 61 aa0.26□□□□□ -2.37
CFHR3-201ENST00000367425 HMCN2Q8NDA2 5059 aa0.25□□□□□ -2.37
CFHR3-201ENST00000367425 MT1HP80294 61 aa0.25□□□□□ -2.37
CFHR3-201ENST00000367425 LRP2P98164 4655 aa0.25□□□□□ -2.37
CFHR3-201ENST00000367425 MT1LQ93083 61 aa0.24□□□□□ -2.37
CFHR3-201ENST00000367425 SPRR2GQ9BYE4 73 aa0.23□□□□□ -2.37
CFHR3-201ENST00000367425 KRTAP19-8Q3LI54 63 aa0.21□□□□□ -2.38
CFHR3-201ENST00000367425 KRTAP19-2Q3LHN2 52 aa0.2□□□□□ -2.38
CFHR3-201ENST00000367425 RNF213Q63HN8 5207 aa0.2□□□□□ -2.38
CFHR3-201ENST00000367425 MT1XP80297 61 aa0.2□□□□□ -2.38
CFHR3-201ENST00000367425 USH2AO75445 5202 aa0.19□□□□□ -2.38
CFHR3-201ENST00000367425 MT1BP07438 61 aa0.18□□□□□ -2.38
CFHR3-201ENST00000367425 MT1HL1P0DM35 61 aa0.18□□□□□ -2.38
CFHR3-201ENST00000367425 MT1GP13640 62 aa0.18□□□□□ -2.38
CFHR3-201ENST00000367425 KRTAP19-6Q3LI70 58 aa0.18□□□□□ -2.38
CFHR3-201ENST00000367425 KRTAP19-7Q3SYF9 63 aa0.18□□□□□ -2.38
CFHR3-201ENST00000367425 MT2AP02795 61 aa0.16□□□□□ -2.38
CFHR3-201ENST00000367425 MT1FP04733 61 aa0.16□□□□□ -2.38
CFHR3-201ENST00000367425 MT1MQ8N339 61 aa0.16□□□□□ -2.38
CFHR3-201ENST00000367425 MT4P47944 62 aa0.16□□□□□ -2.38
CFHR3-201ENST00000367425 MUC12Q9UKN1 5478 aa0.15□□□□□ -2.38
CFHR3-201ENST00000367425 KRTAP6-1Q3LI64 71 aa0.15□□□□□ -2.39
CFHR3-201ENST00000367425 KRTAP20-2Q3LI61 65 aa0.09□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 102 ms